Pairwise Alignments

Query, 394 a.a., L-arabinose-inducible putative transporter, MFS family from Escherichia coli BL21

Subject, 399 a.a., Inner membrane transport protein YdhP from Alteromonas macleodii MIT1002

 Score =  209 bits (532), Expect = 1e-58
 Identities = 120/391 (30%), Positives = 216/391 (55%), Gaps = 7/391 (1%)

Query: 1   MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIAL 60
           M   + +L L  F +G  EF I+G++  +A ++G+++P+AG ++S YA+GV VGAP++  
Sbjct: 1   MPIALFALTLSAFAIGTTEFVIVGLVPTIATDLGVTLPSAGLLVSLYAVGVAVGAPVLTA 60

Query: 61  FSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII 120
            + +++ KH+LL L+AL V GN +   + SY  L + R+++G  HG FF +G+ + + ++
Sbjct: 61  LTGKWNRKHVLLSLMALFVAGNILAWQAPSYESLILARILTGLAHGVFFSIGSTIATGLV 120

Query: 121 KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPD 180
              K  +A+A M +G+TVA + G+PLGT++ Q F WR TFL+++      +      VP+
Sbjct: 121 AKEKEASAIAIMFTGLTVALVTGVPLGTWIGQNFGWRATFLVVSALGTLALIGSALLVPN 180

Query: 181 ICDEAK-GNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTF 239
              ++K   L EQ   L  P   L++  T+ G  G F  F+Y+   +   +GF+ +A++ 
Sbjct: 181 NLKQSKPATLSEQMKVLVQPRLVLVYLMTILGYGGTFTAFTYLALILQEEAGFAPSAISL 240

Query: 240 IMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFIC 299
            M++ G+ + +GN+  G+++ +  P+    +    + + L  L F  G K  ++I   + 
Sbjct: 241 TMLVYGVSVAVGNIYGGKLADKKGPISALTIIFSALAVILFALTFTMGSKVAAVITVLVW 300

Query: 300 CAGLFALSAPLQILLLQNAK--GGELLGAAGGQ--IAFNLGSAVGAYCGGMMLTLGLAYN 355
            A  F     LQ+ ++Q A+      +  A G    AFN+G AVG+  GG ++  G+  +
Sbjct: 301 GAFAFGNVPGLQVYVVQLAEKFTPNAVDVASGLNIAAFNIGIAVGSILGGAIVD-GMQLS 359

Query: 356 YVALPAALLSFAAMSSLLLYGRYKRQQAADT 386
             A   A++S AA+  +  Y  Y  ++A  T
Sbjct: 360 DTAWIGAIISVAAL-LVTRYSGYLDKRALST 389