Pairwise Alignments

Query, 303 a.a., nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function from Escherichia coli BL21

Subject, 307 a.a., recombination-associated protein RdgC from Ralstonia solanacearum PSI07

 Score =  199 bits (506), Expect = 7e-56
 Identities = 108/301 (35%), Positives = 176/301 (58%), Gaps = 3/301 (0%)

Query: 2   LWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVAN 61
           +WFKNL ++RL    ++  +++EK LA  AF P  S +M   GW  P      AL +  N
Sbjct: 1   MWFKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEMQSFGWASPRDD--GALVYSIN 58

Query: 62  GQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFS 121
            Q+++  R E+K+LP+ V+ Q  +A+  ++E +Q  KL + +   LK++V   LLPRAF+
Sbjct: 59  RQMLLVFRAEKKLLPASVVNQVTKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRAFT 118

Query: 122 RFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVR 181
               T +WIDT NG +++D A+   A+D   LL KS+  LP+  + +       +T+W+ 
Sbjct: 119 IRRDTRVWIDTANGWLVIDAAAQALADDVRGLLVKSIDQLPLASVRVALSPVAAMTDWLL 178

Query: 182 SGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQ 241
           SG A  GF +  +AEL+S  E G  +R     L ++++  HIEAGK   +LA+ W  RI 
Sbjct: 179 SGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGKQCMRLAMTWDNRIS 238

Query: 242 FVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEA 301
           FV+    ++KR+   D +++  ED   ++  +RF++D  LMTGEL  ++ +L++ LGG+ 
Sbjct: 239 FVLTPSLTIKRVTPLDVIKEA-EDPTAQNDDERFESDVTLMTGELGRMLTDLVDILGGDQ 297

Query: 302 Q 302
           Q
Sbjct: 298 Q 298