Pairwise Alignments

Query, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

Subject, 303 a.a., Transcriptional regulator YbhD, LysR family from Variovorax sp. SCN45

 Score =  136 bits (343), Expect = 5e-37
 Identities = 84/278 (30%), Positives = 141/278 (50%), Gaps = 2/278 (0%)

Query: 6   INYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWR 65
           I  F+A+A+ GSF  AA AL+V+Q A++Q++R+LEE LGV L +R+ R++ LT  G  + 
Sbjct: 8   IQAFVAIADEGSFQAAAGALNVTQTAITQRLRKLEEFLGVALVERTTRSVALTTIGRDFV 67

Query: 66  QYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQ 125
             A R L EL      I +     RG + IA  PT    F+  +M  + A++P   +++ 
Sbjct: 68  PRARRLLVELADSLLEIRETGKAERGDVSIACVPTAGVQFLPRIMKAYSAKHPHNRIKIL 127

Query: 126 EMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSR 185
           + S   + + +   E++ GI     HSPEL+++PL+ +   L+  + HPLA  +++A  +
Sbjct: 128 DHSSAAVANAVLHREVEFGIGMVGAHSPELQSVPLIEDEYVLICHEAHPLAQRKRIAWRQ 187

Query: 186 LHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLP--AA 243
           L    L+        R  +D     A    Q   E    S  + L+     + ++P  A 
Sbjct: 188 LEPHPLIFAGHASENRPLLDLALGAASASLQAFYEVQRSSTAVGLVAERVAAAVVPRLAL 247

Query: 244 IATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKA 281
               +  L+ + L  P + RT VL+ RK +  + AA+A
Sbjct: 248 QKGAYPTLRIVELTEPKVSRTLVLMTRKTARLSPAAQA 285