Pairwise Alignments

Query, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

Subject, 307 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  131 bits (330), Expect = 2e-35
 Identities = 90/284 (31%), Positives = 151/284 (53%), Gaps = 7/284 (2%)

Query: 12  VAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWRQYASRA 71
           VAE GS ++A+  LH++QPALS+QIR LE+ LG  LFDR GR + +TDAG     +A+R 
Sbjct: 12  VAELGSLSKASDRLHIAQPALSRQIRMLEKELGTYLFDRHGRGMEITDAGREVLAHATRI 71

Query: 72  LQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEK 131
           ++E+ + + ++       RG++ I  TPT       PL+      +P++ ++        
Sbjct: 72  MEEMESIRSSVVGGKTSFRGTVVIGTTPTVAEIVTVPLVRKIKEAHPNLAVRFSSAFSGY 131

Query: 132 IEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKL 191
           + D + R EL++ I++ P     L  +P++ E+L LV      L +   V+   L +++L
Sbjct: 132 LLDWVQRGELELAISYDPQPLHTLRIVPVMMENLLLVGPASAKLRLDVPVSFESLAEQQL 191

Query: 192 VLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLP-AAIATQHDG 250
           VL SA  + R  +D+   + G+  +  +EA+S  A+++L+R     T LP A+I  Q + 
Sbjct: 192 VLPSARHSLRVILDNCAREVGIKLKTSVEADSFGAMIDLVRNGFGLTALPLASIYAQIEA 251

Query: 251 --LKAISLAPPLLERTAVLLRRKNSWQTAAAK----AFLHMALD 288
             L A  L  P+  R  V +   +   + AAK    AF+ +A D
Sbjct: 252 GVLSAAPLVDPIPMRKLVQVFPADRRVSPAAKFVGDAFIEIAAD 295