Pairwise Alignments

Query, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  130 bits (326), Expect = 5e-35
 Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 3/293 (1%)

Query: 4   RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63
           R +  F+ V   G F++AA  + ++Q  +S+ ++ LEE LG PL +R G    LT AGE+
Sbjct: 4   RTLRAFVEVVRQGGFSQAAEVVSLTQSTVSKAVKTLEEELGTPLLNRLGHRNELTAAGEI 63

Query: 64  WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123
             + A   L E       I+D+  L RG LRI + P         + A + +RYP I ++
Sbjct: 64  AYRRALVLLAEHNDLVAEINDLRGLKRGVLRIGLPPVGCGVLFATMFATYRSRYPDIDIE 123

Query: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVAL 183
           L E   +K+ + L   E+D+     PV   +    P+  E L  V+   HPLA H ++  
Sbjct: 124 LTEYGSKKLRECLEAGEVDLAALLLPV-DEDFNYQPVRNEPLMAVLPISHPLASHTRIDF 182

Query: 184 SRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAA 243
           + L D   +L  A FA   +I   CE  G+ P+V   +  I  +++L+        LP  
Sbjct: 183 TDLADSPFILFEAGFALNAKILAACEHKGVTPKVTARSGQIDFIVDLVAAGLGVAFLPRM 242

Query: 244 IA--TQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVG 294
           +A   QH G+  + L  P  +    L  R ++    AA A+L +A +     G
Sbjct: 243 LAHKHQHAGIALVPLDEPHTDWHIALAWRASAHLPPAALAWLELAKEHADSTG 295