Pairwise Alignments

Query, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

Subject, 301 a.a., DNA-binding transcriptional regulator OxyR from Erwinia amylovora T8

 Score =  132 bits (332), Expect = 1e-35
 Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 3/273 (1%)

Query: 4   RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63
           R + Y +A+AEH  F RAA A HVSQP LS QIR+LE+ LGV L +R+ R +  T AG +
Sbjct: 4   RDLEYLVALAEHRHFRRAADACHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGLL 63

Query: 64  WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123
               A   L+E+   K       +   G L I + PT   Y +  ++ + +  +P + + 
Sbjct: 64  LVDQARTVLREVKVLKEMASQQGEAMSGPLHIGLIPTVGPYLLPQIIPNLHQTFPKLEMY 123

Query: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVAL 183
           L E    ++   L   +LD  I      S     +PL  E + L +   HP    ++VA+
Sbjct: 124 LHEAQTHQLLAQLDSGKLDCAILGLVKESEAFIEVPLFDEPMRLAIYADHPWHERDRVAM 183

Query: 184 SRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAA 243
           S L  EKL++L      R+Q   +C +AG        A S+  +  ++   S  TLLPA 
Sbjct: 184 SELAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLLPAL 243

Query: 244 IATQ---HDGLKAISLAPPLLERTAVLLRRKNS 273
              +    DG+  +    P  +RT  L+ R  S
Sbjct: 244 AVPKERVRDGVCYLPCYKPEPQRTIALVYRPGS 276