Pairwise Alignments

Query, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

Subject, 302 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  131 bits (329), Expect = 2e-35
 Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 19/280 (6%)

Query: 4   RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63
           +H+ YF A+A+ G F RAA A  +SQPALS QIR+LEE +G PL +R  R IRLT  G+ 
Sbjct: 7   KHLRYFDALAKIGHFGRAAEACAISQPALSLQIRELEELIGAPLVERGSRQIRLTALGD- 65

Query: 64  WRQYASRALQELGAGKRAIHDVADLTR-------GSLRIAVTPTFTSYFIGPLMADFYAR 116
             ++A R    L    R++ ++ DL R       G LRI V PT   Y +  ++      
Sbjct: 66  --EFAERTRAIL----RSVDELQDLARAGHGPLSGRLRIGVIPTVAPYLLPQVIKTLTRH 119

Query: 117 YPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLA 176
           YP +  + +E   +K+ + L    LD+ I   PV  P LE +PL +E   LV       A
Sbjct: 120 YPGLEARPREAVTQKLIEDLLEARLDMAIVALPVSEPALEEVPLFSEEFILVRPMED--A 177

Query: 177 VHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSL 236
                +  +L + +L+LL      R Q   +C      P+V++E +S+S +++++     
Sbjct: 178 GMPVPSADKLGEMRLLLLEEGHCFRNQALSFCSTTNAPPRVLMEGSSLSTLVQMVGAGIG 237

Query: 237 STLLPAAIATQHDGLKAIS---LAPPLLERTAVLLRRKNS 273
            TL+P         L  +S   LA P   RT  ++ RK++
Sbjct: 238 VTLIPQMAVDMETRLSTVSVFRLAEPRPSRTIGIVWRKSN 277