Pairwise Alignments

Query, 283 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 289 a.a., MDR efflux pump AcrAB transcriptional activator RobA from Escherichia coli ECRC98

 Score =  137 bits (345), Expect = 3e-37
 Identities = 90/284 (31%), Positives = 142/284 (50%), Gaps = 9/284 (3%)

Query: 6   ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 65
           I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++     +G YIR RRL ++A+ 
Sbjct: 6   IIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVA 65

Query: 66  VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 125
           +RLTA+ +LDIAL   FDSQQ+F+R FKK F  +P  YR    W    I P   + +   
Sbjct: 66  LRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTM 125

Query: 126 TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT---DIYFVSTF 182
            E + +   +TP+ G +  Y   +   S D   ++R       + N  T    +Y ++  
Sbjct: 126 PEHKFVTLEDTPLIGVTQSYSCSLEQIS-DFRHEMRYQFWHDFLGNAPTIPPVLYGLNET 184

Query: 183 EPSTKSVDLLTVETFAGTVCEYAD----MPKEWTTTRGLYASFRYEGNWENYPDWVRNIY 238
            PS    D   V        + AD             G Y  F YEG      +++  +Y
Sbjct: 185 RPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVY 244

Query: 239 LIELPARGLARVNGSDIERFYYNEDFVEKDGN-DVVCEIFIPVR 281
              +P   L R  G DIER+Y  ED    D   ++ CE+ IP+R
Sbjct: 245 GTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIR 288