Pairwise Alignments

Query, 183 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase from Escherichia coli BL21

Subject, 198 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Serratia liquefaciens MT49

 Score =  275 bits (703), Expect = 4e-79
 Identities = 126/174 (72%), Positives = 145/174 (83%)

Query: 1   MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60
           M LEQGW+VG  RV SPH D RP++E P+LLV+HNISLPPGEFGGP+ID LFTGT+DP  
Sbjct: 1   MQLEQGWIVGVTRVVSPHCDLRPNEEAPSLLVIHNISLPPGEFGGPYIDRLFTGTLDPAD 60

Query: 61  HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120
           HP+F++I  LRVSAHCLIRRDGEI+QYVPFD+RAWHAGVS YQGRERCNDFSIGIELEGT
Sbjct: 61  HPYFSDIHQLRVSAHCLIRRDGEIIQYVPFDRRAWHAGVSSYQGRERCNDFSIGIELEGT 120

Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174
           D +A+T  QYQ L  VT  LI  YP +A ++TGH +IAP RKTDPGPAFDW  +
Sbjct: 121 DHVAFTPQQYQSLNVVTALLIRHYPTLAAHITGHSNIAPGRKTDPGPAFDWGLY 174