Pairwise Alignments

Query, 361 a.a., Alpha-keto acid-binding periplasmic protein TakP from Azospirillum sp. SherDot2

Subject, 369 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  172 bits (436), Expect = 1e-47
 Identities = 116/353 (32%), Positives = 173/353 (49%), Gaps = 9/353 (2%)

Query: 3   RRQFFKGAAVAAGASTLAAPAIAQSEPTIRWRCVSSFPKNIDVLYGSAEVMAKNVAEATD 62
           RR   KGAAVAAGA ++   A AQ+  T+R++  S++P   D+ +  A+  AK V +   
Sbjct: 10  RRGMLKGAAVAAGAMSVPMIATAQTT-TLRFQ--STWPAK-DIFHEYAQDFAKKVNDMAG 65

Query: 63  GKFQIQVFAAGEVVPALQALDAASNDTVEMCHTASYYYVGKDPAFA-FGCCLPFGLNTRQ 121
            + +I+V  AG VVPA Q LDA +  T++  H    Y+ GK+ A A +G    +G++   
Sbjct: 66  SRLKIEVLPAGSVVPAFQLLDAVAKGTLDGGHGVVAYWYGKNSALALWGSGPGYGMDANM 125

Query: 122 QNAWFYHGEGGKLLEEFYAGYNLKALA--GGNTGAQMGGWFRNEIKSVEDLKGLKFRISG 179
             AW  +G G  L+EE Y   NL  ++   G    Q  GWF+  +  V D+KGLKFR  G
Sbjct: 126 VLAWHKYGGGKALMEEIYKSLNLDVVSYLSGPMPCQPLGWFKKPVAKVTDMKGLKFRTVG 185

Query: 180 LGGQILAKLGVVAQQVGGGDIYPALERGTIDAAEFNGPYDDEKLGLYKIAPNYYYPGWWD 239
           L   +   +G     + GG+I PAL+RG IDAAEFN    D  LG   +A N     +  
Sbjct: 186 LAVDVFTDMGTAVNPLPGGEIVPALDRGLIDAAEFNNASSDRVLGFPDVAKNCMLQSFHQ 245

Query: 240 GTSLQHFFINTKRWNDLPKHYQAAMTAAAALANIDSVARYDVLNPAALKRVVANGAKLRA 299
                    N  + N LP   +A +  AA  A+ D   +    N    + +  +G K   
Sbjct: 246 SGEQFEILFNKTKLNALPAELKAIIDNAAEAASADMSWKAIDRNSQDYEALKKDGIKFYK 305

Query: 300 FPQDVLQASHKAAMELYDELSDKNPAFKKFYESYRRFQNDSNLWLQASDYAYD 352
            P  +L+A   +  +   + + +NP FKK  +S + F   +  W   +DY  D
Sbjct: 306 TPDPILRAQLASWDKTIAKKAGENPLFKKVLDSQKAFAQRAGQW--HNDYTVD 356