Pairwise Alignments

Query, 310 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 306 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  204 bits (518), Expect = 3e-57
 Identities = 120/298 (40%), Positives = 172/298 (57%), Gaps = 6/298 (2%)

Query: 2   DSLNGFVVFVQVAETRSFVAAGRLLGVSASAIGKSVARLEEKLGVRLFHRSTRSVTLTAE 61
           D LNG  VFV   E  SF  A   L +S SA+GK++ARLE++L VRLFHR+TRS++LT +
Sbjct: 3   DRLNGISVFVTAVEAGSFALAASRLHLSRSAVGKTIARLEQRLAVRLFHRTTRSLSLTDD 62

Query: 62  GTLFLERSRRILAEIEAAELELSQATAAPRGRLRVSLPLV--SSLVLPVLGEFMREYPEI 119
           G LF ER  R L EI  AE+ L        GRLRVS+P++     + P+L    RE+P +
Sbjct: 63  GALFYERCLRALEEIRTAEMLLESGKQQVNGRLRVSMPVLFGRMCIAPLLTSMAREHPGL 122

Query: 120 ELDLDFTDRLVDVIEDGFDAVVRTGE-PADSRLSARRLGRFHMRLVASPDYLARRGIPRT 178
           EL+L F DR+VD+IEDGFD  +R G   + S L ARR+G   M L A+P+YL R G P+T
Sbjct: 123 ELELSFNDRVVDLIEDGFDLAIRNGTLVSSSGLVARRVGDHRMTLCAAPEYLLRSGEPKT 182

Query: 179 PTDLLQHSCLHYRFPNSGKLETWALRQTPGEPELRLP-TSMICNNIETRVCFALQGLGIA 237
              L QH  + Y    +G +  W L    G+ +  +P   +  ++++      + G GIA
Sbjct: 183 LEQLAQHDAVTYM--RAGVVLNWTLLDACGKEQEVIPKKGLQMDDLQAIADATVAGFGIA 240

Query: 238 YLPDFSIREPLADGRLQPILADHVERTGVFHVLWPASKHPSPKVRALVDFLHARVFPA 295
           +LP + +RE L  G L  ++ +    +   H +WP + H   KVR  VD L +++ P+
Sbjct: 241 WLPCWLVREALLKGELVRLMRNRPGMSFDVHAVWPQTPHLPLKVRLAVDTLVSKLPPS 298