Pairwise Alignments

Query, 358 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Azospirillum sp. SherDot2

Subject, 364 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Pseudomonas sp. DMC3

 Score =  314 bits (805), Expect = 2e-90
 Identities = 170/344 (49%), Positives = 227/344 (65%), Gaps = 14/344 (4%)

Query: 19  WQRLWASLFGTPLNAAVTLCCLALLGWAVPPLLRWTLLDAVWVGPADRCTDAAGACWAFI 78
           W R  A++F + LN  +TL    L+   VPP+L W ++DA WVG         GACW FI
Sbjct: 22  WMR--ANMFSSWLNTLLTLFAFYLIYLVVPPILSWAIVDANWVGTTRADCTKEGACWVFI 79

Query: 79  GEKLRYILFGFYDQDRQWRPAVAGAILLALAGLSGMPLFWRRATLWLWLFGLA------- 131
            ++    ++G+Y  + +WR  V   + LA+ G +  PLF  R      ++GL+       
Sbjct: 80  QQRFGQFMYGYYPTELRWR--VDLTVWLAVIGAA--PLFISRVPRKA-VYGLSFLVLYPI 134

Query: 132 AALLLLTGGPGGPAVPTERWSGLPVSLLLAVVGLAGAFPLAVLLALARRSSMGGVRTLAV 191
            A +LL GG G   VPT +W GL ++L++A VG+AGA PL ++LAL RRS+M  +R + V
Sbjct: 135 IAFILLHGGFGLTTVPTSQWGGLMLTLVIATVGIAGALPLGIVLALGRRSNMPAIRVVCV 194

Query: 192 LFIEVTRGVPLIAVLYVATLLLPLMLPAGAAIDKLLRAQIAIILFVSAYLAEIVRAGLQS 251
            FIE  RGVPLI VL++++++LPL LP G   DKLLRA I +ILF SAY+AE+VR GLQ+
Sbjct: 195 TFIEFWRGVPLITVLFMSSVMLPLFLPEGMNFDKLLRALIGVILFQSAYVAEVVRGGLQA 254

Query: 252 IPAGQYEAAQALGLGYWQSTRLVILPQALRTVIPSIVTLAIGLFQDTTLIIVIGLFDLLN 311
           IP GQYEAA A+GLGYW+S  LVILPQAL+ VIP IV   I LF+DT+L+I+IGLFDLLN
Sbjct: 255 IPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 314

Query: 312 TARTAAKDPAWLGFYDEAFGFAALIYLTVCVIASRYSLWLERRL 355
           + + AA DP WLG   E + FAAL++   C   SRYS+ LER+L
Sbjct: 315 SVKQAAADPKWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKL 358