Pairwise Alignments

Query, 477 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 628 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2

 Score = 69.3 bits (168), Expect = 4e-16
 Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 5/211 (2%)

Query: 15  HAAGRFAEAETLYARVLEAEPGYPDALHLSGILLGQIGRLEEGLVRIAEAVARRPDSAEY 74
           H  GRFA AE  Y  VL  EP +P A +   +LL +  R  E  V +  AVA  P+    
Sbjct: 14  HEDGRFAAAEAGYRAVLVREPSHPQANNNLAVLLRRARRWGEAAVCLRTAVAGWPEDPGV 73

Query: 75  LLNYGNLLRAAGRTGAAMDAYRRAHALGAPQAAEPLSGLLLEHGTRCLDGRDPTAAEAAF 134
             N    L   GR   AM A R A AL +P+A     G     G      ++P  A  A+
Sbjct: 74  RSNLACTLGDQGRVAEAMAAMRVALAL-SPEA----PGSWFNAGNLLRSVQNPRGATIAY 128

Query: 135 MEASRLRPGDLRIRTGLADARFDRQDWEAALAAYRAVLALSPSSRLVWYNSGVAACNAGR 194
             A RL PG     + L D + +      A+ +Y A +   P     + N G A    GR
Sbjct: 129 GRAIRLDPGMGEALSNLGDCQREDGALMQAVDSYLAAIRARPDLPQPFVNLGEALKEQGR 188

Query: 195 MAEAATAFRCAGTLAPDHLDTQEYLVATLFH 225
           +AEA    +      PD    +  L+ TL +
Sbjct: 189 IAEAIGILQKGLEHHPDMAPMRSNLLLTLHY 219



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 28/70 (40%), Positives = 31/70 (44%)

Query: 163 AALAAYRAVLALSPSSRLVWYNSGVAACNAGRMAEAATAFRCAGTLAPDHLDTQEYLVAT 222
           AA A YRAVL   PS      N  V    A R  EAA   R A    P+    +  L  T
Sbjct: 21  AAEAGYRAVLVREPSHPQANNNLAVLLRRARRWGEAAVCLRTAVAGWPEDPGVRSNLACT 80

Query: 223 LFHCGRMAEA 232
           L   GR+AEA
Sbjct: 81  LGDQGRVAEA 90



 Score = 33.1 bits (74), Expect = 3e-05
 Identities = 26/89 (29%), Positives = 34/89 (38%)

Query: 10  LAFDLHAAGRFAEAETLYARVLEAEPGYPDALHLSGILLGQIGRLEEGLVRIAEAVARRP 69
           LA  L   GR AEA       L   P  P +   +G LL  +       +    A+   P
Sbjct: 77  LACTLGDQGRVAEAMAAMRVALALSPEAPGSWFNAGNLLRSVQNPRGATIAYGRAIRLDP 136

Query: 70  DSAEYLLNYGNLLRAAGRTGAAMDAYRRA 98
              E L N G+  R  G    A+D+Y  A
Sbjct: 137 GMGEALSNLGDCQREDGALMQAVDSYLAA 165