Pairwise Alignments

Query, 558 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 758 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score =  156 bits (395), Expect = 2e-42
 Identities = 135/436 (30%), Positives = 189/436 (43%), Gaps = 54/436 (12%)

Query: 145 NRGAVLHALGCQEMAEVALARGRRLAPEAVEAVLNSALVAIAQGRLPDVERYGRRVIALA 204
           N G  L  LG  + A        RL+P+    + N A +  + GR+ + E   R+V+AL 
Sbjct: 341 NLGNALRELGELDRAAECYETAERLSPDDPVVMSNRAALLGSLGRVAEAEILCRKVVALQ 400

Query: 205 PD-----SVQGYALFANARVHLGRPQDGVAAYNRALDIESDNSELKVNRGVARLLLGEMA 259
           P      S  G AL+A  R+   R Q     ++ A   +S N +++ +R + RL+LG+ A
Sbjct: 401 PGIGIPLSNLGQALYAQGRMEEAREQ-----FDAAGAADSTNDDIRFHRAIVRLMLGDFA 455

Query: 260 GGWDDLAARW--ETTASPGVGDDLPRWSGSAIPAGR-LLVVGQAGVGDEILFASLIPDLV 316
            GW    ARW     A P      P+W G    AG+ LL+  + G GD + F    P   
Sbjct: 456 EGWPLYEARWGNRKRAEPNRHFATPQWLGDEDLAGKTLLLWSEQGFGDTLQFVRFAPLAT 515

Query: 317 ESGIACRFVCDTRLVSLLRR--SLKGTEVVGRDADPSVMATPALVDDSVARVPASDLPRY 374
             G          LVSLLR    +     VG D  P  + +P +            LP  
Sbjct: 516 ARGARVILEVQPALVSLLRGMPGIAQVVAVGDDTGPVDLQSPLM-----------SLPMA 564

Query: 375 LRRRPEDFAGQRPYLVADPQRIAALRARHRDVQLC----IGLSWR----------SVAST 420
                E      PYL   P+R+     R  +  L     IGL W           ++   
Sbjct: 565 FGITLESIPAAVPYLAPPPERLEPW-TRRLNASLPPGPRIGLVWAGDSREHDIECTLIDR 623

Query: 421 ERSLGLEQLVAALAPGVAAAGGRLISLQYGVDD----QERRIAGLFHETSVDPSGDLDGF 476
            RSL L+QL   LA   A+     +SLQ G        E R+A L    +     D    
Sbjct: 624 RRSLALKQLEPILAVEEAS----FVSLQVGKQGLQARDEPRVADLTAGIT-----DFADT 674

Query: 477 ASLVAAMDLVITIDNTTAHMAGGLGVPGWVLLPFMPAWFWGGAAATSPWYPSLRLFRQTA 536
           A+L++ +DLVI++D +TAH+A  LG P W+L  F   W W      SPWYP+LRL+RQ A
Sbjct: 675 AALISGLDLVISVDTSTAHLAAALGKPVWLLSRFDGCWRWLQGRDDSPWYPTLRLYRQPA 734

Query: 537 PGDWRGVLGEVGRALR 552
            GDW   L ++   LR
Sbjct: 735 AGDWDTPLAKMATDLR 750



 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 95/360 (26%), Positives = 137/360 (38%), Gaps = 73/360 (20%)

Query: 11  AADHHTAGRLEEAMALYRLVLRVDPVNADGWRLLGKAARAAGDYGAGLGCLQRLIALSPA 70
           A + H AGRL EA+ +Y+ +L  +P +     LLG A    G +   +  +   I  +  
Sbjct: 37  AVELHQAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEAIRANDR 96

Query: 71  DATMFAELAALLAEQGDEAGALAAYGVALRCDPLMEQAAFQRGILLFRRGALKQA----- 125
                  L   L        A AAY  AL  +  + +A F  G  L + G L+++     
Sbjct: 97  VPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQ 156

Query: 126 ----------EAAFRGVGLLV----PALAMAHVNR---------------GAVLHALGCQ 156
                     EA     G+L     PA A+  + R               G  L A G +
Sbjct: 157 SALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASGHR 216

Query: 157 EMAEVALARGRRLAPEAVEAVLNSALVAIAQGRLPDVERYGRRVIALAPD---------- 206
             A+VA+ R  RLAP++   ++ +A V  A+GR+ +   +  R   LAP+          
Sbjct: 217 IEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLMLAR 276

Query: 207 ----------SVQGYA------------LF--ANARVHLGRPQDGVAAYNRALDIESDNS 242
                     S + Y             LF  ANA   + R  + VA Y   L  E D+S
Sbjct: 277 QLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALYQALLAREHDHS 336

Query: 243 ELKVNRGVARLLLGEMAGGWDDLAARWETTASPGVGDDLPRWSGSAIPAGRLLVVGQAGV 302
           E+  N G A   LGE+     D AA    TA     DD    S  A   G L  V +A +
Sbjct: 337 EVWNNLGNALRELGEL-----DRAAECYETAERLSPDDPVVMSNRAALLGSLGRVAEAEI 391



 Score = 54.3 bits (129), Expect = 2e-11
 Identities = 59/277 (21%), Positives = 103/277 (37%), Gaps = 2/277 (0%)

Query: 18  GRLEEAMALYRLVLRVDPVNADGWRLLGKAARAAGDYGAGLGCLQRLIALSPADATMFAE 77
           GRLEE++  ++  L + P   +    +       G     +  L+R +A  P +A++ A+
Sbjct: 146 GRLEESLEFHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQAD 205

Query: 78  LAALLAEQGDEAGALAAYGVALRCDPLMEQAAFQRGILLFRRGALKQAEAAFRGVGLLVP 137
           L   L   G    A  A   ALR  P           ++  RG +++A         L P
Sbjct: 206 LGRALLASGHRIEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAP 265

Query: 138 ALAMAHVNRGAVLHALGCQEMAEVALARGRRLAPEAVEAVLNSALVAIAQGRLPDVERYG 197
               A +     L A+G ++++     R   +    V  + ++A       RLP+     
Sbjct: 266 NYPPAVLMLARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALY 325

Query: 198 RRVIALAPDSVQGYALFANARVHLGRPQDGVAAYNRALDIESDNSELKVNRGVARLLLGE 257
           + ++A   D  + +    NA   LG        Y  A  +  D+  +  NR      LG 
Sbjct: 326 QALLAREHDHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPVVMSNRAALLGSLGR 385

Query: 258 MAGGWDDLAARWETTASPGVGDDLPRWSGSAIPAGRL 294
           +A    ++  R      PG+G  L     +    GR+
Sbjct: 386 VAEA--EILCRKVVALQPGIGIPLSNLGQALYAQGRM 420



 Score = 48.5 bits (114), Expect = 9e-10
 Identities = 33/115 (28%), Positives = 51/115 (44%)

Query: 19  RLEEAMALYRLVLRVDPVNADGWRLLGKAARAAGDYGAGLGCLQRLIALSPADATMFAEL 78
           RL EA+ALY+ +L  +  +++ W  LG A R  G+      C +    LSP D  + +  
Sbjct: 317 RLPEAVALYQALLAREHDHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPVVMSNR 376

Query: 79  AALLAEQGDEAGALAAYGVALRCDPLMEQAAFQRGILLFRRGALKQAEAAFRGVG 133
           AALL   G  A A       +   P +       G  L+ +G +++A   F   G
Sbjct: 377 AALLGSLGRVAEAEILCRKVVALQPGIGIPLSNLGQALYAQGRMEEAREQFDAAG 431