Pairwise Alignments

Query, 652 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2

Subject, 683 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  256 bits (653), Expect = 3e-72
 Identities = 210/641 (32%), Positives = 287/641 (44%), Gaps = 39/641 (6%)

Query: 22  QSTAPAASAGDAGFGRALSLHREGRTAEAEAGYRTVLAADAGHTNANNNLAIILRARGDW 81
           Q+  P  +   +  G   +L R+GR AEAEA +R  L         + N  + L+A G  
Sbjct: 45  QAGTPEEAVARSNLGE--TLRRQGRLAEAEAHHRKALDWLPDFGGNHYNWGVTLQALGRP 102

Query: 82  EEALGCYRRALARNAADPFVHSNHGCLLQDMGRSAEAEEALRTAIRLKPEYAEAHFNLAN 141
            EA   Y  A            N G LL+++GR  EAE ALR A+ L      A   LA 
Sbjct: 103 AEAAAAYGEAARLMPGFAPAPCNQGVLLRELGRLDEAEAALRRALELDHALVPARLALAA 162

Query: 142 ILRNRGDREAAKAAYGEALRLKPDMAAALCNL-------GDLHKGAVELARAVECFVAAL 194
           + R+RGD + A A +   L L PD+A    NL       G     A + A ++  F  AL
Sbjct: 163 LHRDRGDLDRAAAGFRACLSLMPDLAEGQANLALALKERGQRGGPAEDAAASIVGFDRAL 222

Query: 195 KAD-PKSAEAWNNLGETLKEMGRIEEAIGVFQKGL-----EAHPSHALMHSNLLLALHYT 248
           +   P +      L +  + + R    +G     L     E     A  +  ++L     
Sbjct: 223 RIGLPDAGGVLAQLVQQRRHLCRWA-GLGALSARLVDLVREGRTQQA--YPWIVLGEGAG 279

Query: 249 PAVPPETIFRAHMAWAQRHADPLLPAGSRHANPRDPDR--RLRIGYVSPDFCAHSVAFFA 306
           PA+      R +  W  R        G R   P+  DR  +LRIGY+S DF  H+ A   
Sbjct: 280 PALERACAER-YSGWKTR--------GIRPGFPKRTDRGAKLRIGYLSTDFHEHATAVLI 330

Query: 307 EPLIREHDRGHFEVF-CYPASARSDVVTERLKGLSDGWRSLVGVDDARAAALIEQDGIDI 365
             LI  HDR  FE+  C         + +RL    D    L  + D  AA LI + G+DI
Sbjct: 331 AELIERHDRDRFEIIGCSYGPDDGGPLRKRLVAGFDRLLDLSALTDEAAARLIHEAGVDI 390

Query: 366 LVDLTGHTANNRLTLFARKPAPVQATWLGYPDTTGMRAIDWRFSDAIAEPPGEADRLSAE 425
           LVDL GHT N R  + A +PAPVQA WLGYP T G  AID+  +DA+  P  +  R   E
Sbjct: 391 LVDLKGHTQNARPGIAAYRPAPVQAQWLGYPGTLGSTAIDYVIADAVVAP-ADHQRFYCE 449

Query: 426 RIVRLPQGFHSYRPPLDVAPP---AEPPFHANGHVTFGSFNNTSKVTGEVVRVWSEILKR 482
           RIV LP  +        + P    A+    A G V F +FN   K+  ++   W  IL+R
Sbjct: 450 RIVHLPDSYQPNDRQRSIGPTPGRADCGLPAEGFV-FCAFNAPYKIGPDLFGRWCRILQR 508

Query: 483 VPGSRLIVKSAQMGDEETRRRYLNTFVQCGIDAGRIELLARIDAANGHLRAYDRIDIGLD 542
           VPGS L +     G  E          + G+   R+    R+     HL  +   D+ LD
Sbjct: 509 VPGSVLWLLD---GPAEVAANLRGAAAERGVAPERLIFAPRLPGP-AHLARHRLADLFLD 564

Query: 543 PFPYNGTTTTCEALWMGVPVVTLTGANHVARVGASLLTHCGLTELVASDMEGYIATAVAL 602
             P    TT  +ALW G+PV+++ G +   RV ASLL   GL +L  +D + Y ATA  L
Sbjct: 565 SAPVGAHTTASDALWAGLPVLSVPGRSFAGRVAASLLRAVGLPKLAVADWDAYEATAQRL 624

Query: 603 AGDPGRLDRLRRTMRSRLNAAPLTDYKGFARGVEAAYRAMW 643
           A  P  L  L+  +      APL D   FAR +E+A+  MW
Sbjct: 625 AEQPAELAALKLRLEQACATAPLFDTDRFARSIESAFATMW 665