Pairwise Alignments

Query, 389 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 226 a.a., L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ from Variovorax sp. SCN45

 Score =  203 bits (517), Expect = 3e-57
 Identities = 112/227 (49%), Positives = 158/227 (69%), Gaps = 12/227 (5%)

Query: 165 LCNRGIQLPAFADGRAGGWMLAAVALALALALAG---TVLRRRLGRRDAVSGMSVAAAAC 221
           + NRG+ +PA       G  + A+ + LA+A+       L +R+  R       +   A 
Sbjct: 1   MSNRGLLVPAVE-----GHSVTAIGVGLAIAVGAIFLVALLQRVRFRQTGHARPLWPWAI 55

Query: 222 GLPVALLLA----SGAPLQVEVPELAGFNFSGGTTVSPEFSALLVGLVVNAAAMIAEIVR 277
           GL +AL LA    +G  +++++P  +GF+F GG ++SPE  ALL GL+   AA IAEIVR
Sbjct: 56  GLGIALPLAGWLLAGQDVRLDLPRASGFSFEGGWSLSPELFALLAGLITYTAAFIAEIVR 115

Query: 278 SGIQAVPGGQWEAARALGLPRRRIMRLVVLPQAMRVIVPLLTSSYLNLTKNSSLAVAIGF 337
           +GIQA+  GQWEAA++LGL R +++RLV++PQA+RVIVP LTS YLNL K+SSLAVAIG+
Sbjct: 116 AGIQAIGQGQWEAAQSLGLRRGKVLRLVIVPQALRVIVPPLTSQYLNLIKHSSLAVAIGY 175

Query: 338 PDLVSVINTSANQTGQVLETMAIMMGAYLTVNLAVSAAMNLYNRRLA 384
           PDLVSV+NT+ NQTGQ +E + I+MGA++TV+L +S  MN YN+R+A
Sbjct: 176 PDLVSVVNTTLNQTGQAIEGILIIMGAFMTVSLLISLLMNWYNKRIA 222