Pairwise Alignments

Query, 239 a.a., HTH-type transcriptional repressor NagR from Azospirillum sp. SherDot2

Subject, 250 a.a., Putative alkanesulfonate metabolism utilization regulator from Pseudomonas fluorescens GW456-L13

 Score =  102 bits (255), Expect = 5e-27
 Identities = 70/232 (30%), Positives = 122/232 (52%), Gaps = 5/232 (2%)

Query: 7   NATALYRQIADRLRDEIAARLFEPSGRLPTESEIGARFGVSRVTVRLALDRLEADGLIER 66
           ++  L+ Q+ D LR  I    +    ++P+ESE+GA F VSR+TVR AL  L+ +GLI +
Sbjct: 9   SSVPLHTQLRDVLRARILDGEYPQDSQMPSESELGALFKVSRITVRQALGDLQKEGLIFK 68

Query: 67  RKGKGTFTAGKRVQHPLDRLRSFHESLRLQGLDATMRPLSARIVPTPAELREDF----GP 122
             GKGTF A  +    +  L+   ES+  +G +   R  S + +     + E      G 
Sbjct: 69  IHGKGTFVAKPKTFQNVSTLQGLAESMTDRGYEVINRLRSFKFIAADKLVAERLQVAEGE 128

Query: 123 HCLEVCRLHLVDGEPVALGRSLLPPAL-EPVDWQAAGHRPIYGILQDIVGKPVGGADIEV 181
              ++ R+ L++ EPV+L  + LP A+ E ++      R I+ IL++  G  +G AD+ +
Sbjct: 129 VVAQIKRVRLINREPVSLEITYLPKAIGERLEKADLVTRDIFLILENDCGLALGHADLAI 188

Query: 182 KAAAADAEVAAALGLPAGAPVLVMDRRSVFVGGGCADRSVFHIRSERYSFIL 233
            A  AD+++  AL +  G+P++ ++R +  V G   D    + R + + + L
Sbjct: 189 DAVLADSDLTHALNVEPGSPIMHIERLTHDVDGRPLDFEHLYYRGDAFQYRL 240