Pairwise Alignments

Query, 346 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 324 a.a., Putative aliphatic sulfonates-binding protein from Pseudomonas sp. DMC3

 Score =  134 bits (337), Expect = 3e-36
 Identities = 101/330 (30%), Positives = 149/330 (45%), Gaps = 23/330 (6%)

Query: 12  RRAFLARSLIGAGAAGLATGFDPLAGTLSTARAATQTTAGRNTDTIRLTWGFSGLAFIAK 71
           R  FL R L+   AA +  G            A TQ  A    +T+R+ +   G   + K
Sbjct: 2   RTVFLRRGLVALFAAAVTFG------------AITQAQA----ETLRIGYQKYGTLVLLK 45

Query: 72  ERGELEKTLAKDNIKVEWLGPFPNHAPTLQAVTGGTADFSFGGSTTPALAAIIAGSPLVF 131
            +G LEK LA   + V+W   FP     L+ +  G+ DF   G T P  A   AG+ L++
Sbjct: 46  AKGTLEKRLAAQGVDVQWT-EFPGGPQLLEGLNVGSIDFGVTGETPPVFAQA-AGADLLY 103

Query: 132 SLFLNYTPRTTAIIAKDGSGIDKVTDLVGKSVAVNRSGLGEFLLVAALEKHGVDRSKVNF 191
             +    P + AI+    S I  V DL GK VA+N+     +LLV ALE  G+  S +  
Sbjct: 104 VAYEPPAPNSEAILVPKDSPIKSVADLKGKKVALNKGSNVHYLLVRALEDAGLKYSDIQT 163

Query: 192 VYLNPPDAAPALASGKVDAWSMWSPGVDIARLEYKAHDIFQEERDLDFQIDFTSYLTRRR 251
           V+L P DA  A   G VDAW +W P    A  + +AH +   +  +D   +   YL  + 
Sbjct: 164 VFLPPADARAAFERGSVDAWVIWDPYQAAAEKQLQAHTLRDGKGIVD---NHQFYLATKP 220

Query: 252 FAQENPALIRALNAAFTAEAAWASANTVEAETIVQAKAGYRDEIRDGYIALKRQYRLYPV 311
           +AQ+NP +I+ L     A   W+ AN  +    V    G   +I     ++KRQ      
Sbjct: 221 YAQKNPEVIKTLVEEVRAVGEWSQANPEDVTQQVAPLLGLPADIT--LTSVKRQGYGALF 278

Query: 312 SDAAFVGDLQKAADWLVARRILPEPVRVAD 341
                V   QK AD     +++P+P+ + D
Sbjct: 279 LTPEVVAAQQKIADTFFQLKLIPKPLSIKD 308