Pairwise Alignments

Query, 346 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 314 a.a., aliphatic sulfonate ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  114 bits (285), Expect = 3e-30
 Identities = 87/309 (28%), Positives = 139/309 (44%), Gaps = 7/309 (2%)

Query: 34  PLAGTLSTARAATQTTAGRNTDTIRLTWGFSG-LAFIAKERGELEKTLAKDNIKVEWLGP 92
           PLA  L    A T   + +  +T+R+ +  S  L  + K +G LEK L  DNI V W   
Sbjct: 6   PLAAVLGLL-AFTVAVSAQAQETVRIGYQKSSTLITLLKTQGTLEKALKADNIDVSW-HE 63

Query: 93  FPNHAPTLQAVTGGTADFSFGGSTTPALAAIIAGSPLVFSLFLNYTPRTTAIIAKDGSGI 152
           FP+  P L+A+  G  D S   + T  + A  A + L +      +P   AI+ +  S I
Sbjct: 64  FPSGLPLLEALNVGNVDISADVADTVPIFAQAAQAKLTYFAQEAPSPSAQAIVVRKDSPI 123

Query: 153 DKVTDLVGKSVAVNRSGLGEFLLVAALEKHGVDRSKVNFVYLNPPDAAPALASGKVDAWS 212
            ++ DL GK +AV ++    +LL+AAL K G+  S +   YL+P D   A  + KVDAW 
Sbjct: 124 QQLADLKGKKIAVTKAAGTHYLLIAALAKAGLAFSDIEPAYLSPADGRAAFENNKVDAWV 183

Query: 213 MWSPGVDIARLEYKAHDIFQEERDLDFQIDFTSYLTRRRFAQENPALIRALNAAFTAEAA 272
            W P +   + +     +        ++     YLT   +A+ +P ++  + A       
Sbjct: 184 TWEPFLTSVQRQLPTRTLADGTGLASYK---RYYLTGTPYAKAHPDVLNVVYAQLEKAGQ 240

Query: 273 WASANTVEAETIVQAKAGYRDEIRDGYIALKRQYRLYPVSDAAFVGDLQKAADWLVARRI 332
           W   +  +A  ++    G  D          R Y++ PV+    +G+ QK AD      +
Sbjct: 241 WVKTHPQDAANVLGPLWGNLDVATVEAANAHRSYQVQPVT-IDQLGEQQKIADAFFKAGL 299

Query: 333 LPEPVRVAD 341
           LP+ V   D
Sbjct: 300 LPKAVDAKD 308