Pairwise Alignments

Query, 346 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 312 a.a., aliphatic sulfonate ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  105 bits (263), Expect = 1e-27
 Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 6/277 (2%)

Query: 64  SGLAFIAKERGELEKTLAKDNIKVEWLGPFPNHAPTLQAVTGGTADFSFGGSTTPALAAI 123
           S L  + K+ G+LE+ L      V W          L ++  G+ D     +   AL   
Sbjct: 33  STLWILLKQNGQLEQRLKPLGFTVNW---HEFSTGLLSSLNAGSVDLHADVADAFALFTQ 89

Query: 124 IAGSPLVFSLFLNYTPRTTAIIAKDGSGIDKVTDLVGKSVAVNRSGLGEFLLVAALEKHG 183
            A +PL +    N +P   AII +D S I  + DL GK+VAV++     FLL++AL+K G
Sbjct: 90  AADAPLTYYAQENSSPGAQAIIVQDQSPIHSIADLKGKTVAVSKGSGSNFLLISALKKAG 149

Query: 184 VDRSKVNFVYLNPPDAAPALASGKVDAWSMWSPGVDIARLEYKAHDIFQEERDLDFQIDF 243
           +  + +   YL  PD   A A+G VDAW +W P +   +L++    I   +  L     F
Sbjct: 150 LTLADITPRYLEAPDGGAAFANGSVDAWVIWDPFLASQQLDHHVRVIADGKDGLADYNRF 209

Query: 244 TSYLTRRRFAQENPALIRALNAAFTAEAAWASANTVEAETIVQAKAGYRDEIRDGYIALK 303
             YL   +FA+ +P +++           W  A+  EA  I+    G            +
Sbjct: 210 --YLATTKFAKAHPDVLQVTFDTLRETGQWVKAHPKEAADILGPLWGNIAPATVERANSR 267

Query: 304 RQYRLYPVSDAAFVGDLQKAADWLVARRILPEPVRVA 340
           R Y + PV     + + Q+ AD     +++P+P++V+
Sbjct: 268 RSYDIIPVK-VENLAEQQRIADTYYTAKLIPKPLKVS 303