Pairwise Alignments
Query, 612 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 643 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45
Score = 281 bits (718), Expect = 8e-80
Identities = 211/629 (33%), Positives = 321/629 (51%), Gaps = 52/629 (8%)
Query: 14 INGLVIGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAYIGWLCVTKLNLPLPV--TFI 71
+NGL + +A GL+LIFGV+ ++NFAHGS +MVG Y+ + V KL L +
Sbjct: 11 LNGLAGASSLFFVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYTLVDKLGSSLGFWPALL 70
Query: 72 VVAAGCGLLGAVIERVGLRPLRNAPRIAPLLATIGLSVVLDQSAQLLFSPDPRALPTQLP 131
+ A G+LGA+IE V LR + AP + LLAT L +V+ + L+ PD L + P
Sbjct: 71 IAAVAVGVLGALIEVVLLRRIYKAPELFQLLATFALVLVIKDAVLWLWGPD-ELLGPRAP 129
Query: 132 TWR--IAIGGGSIGALDLLIAGVGIGSAALLYGFLRFTKLGWAVRATALDRDAAQQCGVD 189
+ + I G + DL + VG L++ L T+ G VRA DR+ GV+
Sbjct: 130 GLKGSVEILGRQFPSYDLFLIVVGPLVLGLVWLLLTRTRFGTLVRAATQDREMVSALGVN 189
Query: 190 VDKVNRTVFAIASALGGVSGLL--------VGMYYNTIDPNMGFQAGLKGIVAQLIGGVG 241
+ VFA+ + L G+ G L + M NTI V ++GG+G
Sbjct: 190 QAWLFTAVFALGALLAGLGGALQLPREPATLEMDLNTIGA---------AFVVVVVGGMG 240
Query: 242 NVPGAIAGSLL----------LGLIESYGIALFGTSYRNLFAFVALILILVLRPNGLFAR 291
++PGA +LL LG+++ +GI + + + F+ + ++LV RP GLF R
Sbjct: 241 SLPGAYVAALLIAEIKAVCIWLGVVQIFGIDVSFSKLTLMVDFLVMAIVLVWRPWGLFGR 300
Query: 292 ARR------LPPEPLTGTFIAPSRPLVLPRWAVWALAAAALALPLVVQQPYLLQTLGNAW 345
+ + EPL PS ++ AV AL AAL L L V PY + + +
Sbjct: 301 PQAPSRYVGMQEEPLR----RPSNAYLIAA-AVLALMLAALPL-LTVNSPYTMVLMIDLL 354
Query: 346 LYALLALSLTLVAGTVGQVSLGHAGLLAIGAYASSLLALDAGVPVLLAVPLAGLVAAALG 405
+ AL A SL + G G S GHA +GAY ++LL +P+ +A+ +A +VAA LG
Sbjct: 355 IAALFATSLHFIMGPAGMHSFGHAAYFGLGAYGAALLVRSLHLPMEVALLVAPVVAA-LG 413
Query: 406 TALVYPAF--RLRGHYVSIATLAVGEIVTLVILNWESLTRGPIGVTGIPPLSVAGKPLVS 463
ALVY F RL G Y+++ TLA +I + W+S T G G+TG+ P + L +
Sbjct: 414 -ALVYGWFAVRLSGVYLAMLTLAFAQITWAITYQWDSFTGGSNGLTGVWP----SEWLSN 468
Query: 464 GQWVYWVPLAVLLAFAALQSRLLSSHLGRTLRAIREDDVAARSYGVDLNRYKGLAFAVAG 523
Q YW+ L ++ A R+L S G LRA R+ + A + G+D+ R + AF +AG
Sbjct: 469 KQAYYWLTLVLVGAGVWWLRRVLFSPFGYALRAGRDSVLRADAIGIDVKRMQWAAFVIAG 528
Query: 524 FIAGVGGALMAHFYSYINHETFPAPVSMLALTMVILGGLGNVAGAVLGAAVLVGLPELFR 583
+AG+ GAL A I+ E+ S+ L MV+LGG+ +AG V+GA L +
Sbjct: 529 TVAGLAGALYAFSKGSISPESLSVGKSVDGLVMVLLGGIQTLAGPVVGAVTFTWLHDTVA 588
Query: 584 AAAEYRMLIYGVVLLLLIRFRPQGLLGTV 612
+Y + G ++L+L+ PQG+ G++
Sbjct: 589 RNTDYWRAMLGAIILILVLLFPQGIAGSI 617
Score = 65.1 bits (157), Expect = 9e-15
Identities = 76/307 (24%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 12 YTINGLVIGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAYIGWLCVTKLNLPLPVTFI 71
YT+ ++ I AL A L I G + + +F H + + +GAY L V L+LP+ V +
Sbjct: 345 YTMVLMIDLLIAALFATSLHFIMGPAGMHSFGHAAYFGLGAYGAALLVRSLHLPMEVA-L 403
Query: 72 VVAAGCGLLGAVIERVGLRPLRNAPRIAPLLATIGLSVVLDQSAQLLFSPDPRALPTQLP 131
+VA LGA++ G +R L+ + L+++ AQ+
Sbjct: 404 LVAPVVAALGALV--YGWFAVR--------LSGVYLAMLTLAFAQI-------------- 439
Query: 132 TWRI-----AIGGGSIGA-----------------LDLLIAGVGIGSAALLYGFLRFTKL 169
TW I + GGS G L L++ G G+ + F+
Sbjct: 440 TWAITYQWDSFTGGSNGLTGVWPSEWLSNKQAYYWLTLVLVGAGVWWLRRVL----FSPF 495
Query: 170 GWAVRATALDRDAAQQCGVDVDKVNRTVFAIASALGGVSGLLVGMYYNTIDP-NMGFQAG 228
G+A+RA A G+DV ++ F IA + G++G L +I P ++
Sbjct: 496 GYALRAGRDSVLRADAIGIDVKRMQWAAFVIAGTVAGLAGALYAFSKGSISPESLSVGKS 555
Query: 229 LKGIVAQLIGGVGNVPGAIAGSLLLGLIESYGIALFGTSYRNLFAFVALILILVLRPNGL 288
+ G+V L+GG+ + G + G++ + +A +R + + LIL+L L P G+
Sbjct: 556 VDGLVMVLLGGIQTLAGPVVGAVTFTWLHD-TVARNTDYWRAMLGAIILILVL-LFPQGI 613
Query: 289 FARARRL 295
++L
Sbjct: 614 AGSIKQL 620