Pairwise Alignments

Query, 612 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Pseudomonas sp. DMC3

 Score =  205 bits (521), Expect = 2e-57
 Identities = 113/299 (37%), Positives = 177/299 (59%), Gaps = 17/299 (5%)

Query: 7   GPWLDYTINGLVIGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAYIGWLCVTKL---- 62
           G +L   +NGL +G++Y L+A+G  +++G+  +INFAHG VYM+ AY+  + +  L    
Sbjct: 3   GIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFG 62

Query: 63  --NLPLPV--TFIVVAAGCGLLGAVIERVGLRPLRNAPRIAPLLATIGLSVVLDQSAQLL 118
             + PL +  T I       + G VIERV  +PLRN+ R+APL++ IG+S++L   AQ+ 
Sbjct: 63  IESFPLLMLGTLIFTIVVTAVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIA 122

Query: 119 FSPDPRALPTQLP-TWRIAIGGGSIG-----ALDLLIAGVGIGSAALLYGFLRFTKLGWA 172
                + +PT L   WR+ +G G +         L+ A VG+G   LL   +++TKLG  
Sbjct: 123 QGAKQQGVPTLLTGAWRVEVGTGFVQLTYTKVFILIAAFVGMG---LLTYVIKYTKLGRM 179

Query: 173 VRATALDRDAAQQCGVDVDKVNRTVFAIASALGGVSGLLVGMYYNTIDPNMGFQAGLKGI 232
            RAT  DR  A   G++ D+V   VF I +A+  ++G+L+ M Y T D   GF  G+K  
Sbjct: 180 CRATQQDRKMASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYAGFIIGIKAF 239

Query: 233 VAQLIGGVGNVPGAIAGSLLLGLIESYGIALFGTSYRNLFAFVALILILVLRPNGLFAR 291
            A ++GG+G++PGA+ G ++LG+ ES    L  + Y+++F+F  L+L+LV RP GL  R
Sbjct: 240 TAAVLGGIGSLPGAMLGGIILGISESLFSGLVNSDYKDVFSFSLLVLVLVFRPQGLLGR 298



 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 29/292 (9%)

Query: 340 TLGNAWLYALLALSLTLVAGTVGQVSLGHAGLLAIGAYASSL-LALDA-----GVPVLLA 393
           TLG+  +Y L+A+  T+V G +G ++  H  +  I AY +++ LAL A       P+L+ 
Sbjct: 14  TLGS--VYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPLLML 71

Query: 394 VPLAG--LVAAALGTALVYPAFRLRGHYVSIATLAVGEIVTLVILNWESLTRGPIGVTGI 451
             L    +V A  G  +   A++   +   +A L     ++L++ N+  + +G     G+
Sbjct: 72  GTLIFTIVVTAVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGA-KQQGV 130

Query: 452 PPLSVAGKPLVSG----QWVY---WVPLAVLLAFAALQSRLLSSHLGRTLRAIREDDVAA 504
           P L      +  G    Q  Y   ++ +A  +    L   +  + LGR  RA ++D   A
Sbjct: 131 PTLLTGAWRVEVGTGFVQLTYTKVFILIAAFVGMGLLTYVIKYTKLGRMCRATQQDRKMA 190

Query: 505 RSYGVDLNRYKGLAFAVAGFIAGVGGALMAHFYSYINHETFPAPVSML----ALTMVILG 560
              G++ +R     F +   +A + G L+      +N+ TF      +    A T  +LG
Sbjct: 191 SILGINTDRVISYVFIIGAAMAALAGVLIT-----MNYGTFDFYAGFIIGIKAFTAAVLG 245

Query: 561 GLGNVAGAVLGAAVLVGLPELFRAA--AEYRMLIYGVVLLLLIRFRPQGLLG 610
           G+G++ GA+LG  +L     LF     ++Y+ +    +L+L++ FRPQGLLG
Sbjct: 246 GIGSLPGAMLGGIILGISESLFSGLVNSDYKDVFSFSLLVLVLVFRPQGLLG 297