Pairwise Alignments

Query, 295 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Azospirillum sp. SherDot2

Subject, 287 a.a., ABC transporter ATP-binding protein from Variovorax sp. OAS795

 Score =  202 bits (514), Expect = 7e-57
 Identities = 120/276 (43%), Positives = 164/276 (59%), Gaps = 22/276 (7%)

Query: 5   PKKPLLEIAGLTRRFGGLTAVNGLSLTVGQGELVSVIGPNGAGKTTLFNLISGLDVPDAG 64
           P   +L +  LT  FGG+ A+  +   V  G + +VIGPNGAGKT+LFN ISG   P  G
Sbjct: 13  PAASVLRVEALTLAFGGVKALTNVGFGVAHGSITAVIGPNGAGKTSLFNTISGFYRPAEG 72

Query: 65  SVTFEGRDVTGLSAERLAALGLARSFQHGRVFGNLSVLDNVLVGAHTRLRAVKPRIPLVG 124
            V FEG D+T L A + AALGLARSFQ+  +F  ++VLDN+ +G H  L++         
Sbjct: 73  RVLFEGEDITRLPAPKRAALGLARSFQNIALFRGMTVLDNIKLGRHAHLKS--------- 123

Query: 125 PLVELALALIRPPSVRAEEERLRAEAKEIVRMFGERLTPRLDKPAH----SLSYANRRRV 180
               +  AL      R EE  LR + +E +  F E     +D   H    +L Y  ++RV
Sbjct: 124 ---NVFDALFYLGRARREEAELRRDVEERIIDFLE-----IDHIRHASVAALPYGLQKRV 175

Query: 181 EIARALALHPRLLLLDEPTAGMNPTETAEMLEIIRGLKAR-GLTILLIEHKLDLVMQLSD 239
           E+ARALA+ P++L+LDEP AGMN  ET +M   I  ++   G+T+L++EH + +VM LSD
Sbjct: 176 EMARALAMQPKVLMLDEPVAGMNREETEDMARFILDVRREWGITVLMVEHDMGMVMDLSD 235

Query: 240 RVVVMDHGARIAEGLPAAVASDPAVIEAYLGHKAVG 275
            VVV++ G  IA+G PA V +DP VI AYLG   VG
Sbjct: 236 HVVVLNFGQVIAQGTPAQVQADPEVIRAYLGAGDVG 271