Pairwise Alignments

Query, 303 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 277 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Azospirillum sp. SherDot2

 Score =  117 bits (293), Expect = 3e-31
 Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 29/269 (10%)

Query: 47  RLSSVTALRRLLVLAAVAALWQAAAV-WQNNPLMFPTFTDTAAALWDGIR---------- 95
           R S    LR  LV   V ALWQ  +     NP++ P+        W  +           
Sbjct: 7   RFSPAALLRGSLVPVLVIALWQILSTSGLINPVVLPSPVQVVVRWWAYLLPTEAYDPAQS 66

Query: 96  -------RDNLLSMAWTSLAVLLKGYAVAVVLAVLLTTVAVSTRIGNDLLSTLTSMFNPL 148
                     +L  AW+SL  ++ G+AV   LA+ L            L   L  +  P+
Sbjct: 67  SWILWALSGEMLFDAWSSLYRVVLGFAVGAGLALPLGLAMGGNPRIYALFDPLMQVLRPI 126

Query: 149 PAIALLPIAMLWFGLGEVSLIFVLVHAVLWPLALNTHAGFTSVSETLRMAGRNYGLGGLR 208
           P IA +P+A+LWFGLG    +F++     +P+ +NT AG   V      A RN G G L 
Sbjct: 127 PPIAYIPLAILWFGLGNAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGAGKLT 186

Query: 209 YVVTLLIPAAFPAILTGLKVGWAFAWRTLIAAELVFGVSSGKGGLGWFIFQNRNELYIDK 268
             V +++PAA P IL G ++G   A+  +I +E++    +   GLG+ I + R  ++ DK
Sbjct: 187 MFVRVILPAATPYILAGARIGIGTAFIVVIVSEMI----AVNSGLGFRILEAREFMWSDK 242

Query: 269 VFAGLVTVILIGLLVE-------NVVFRW 290
           + AG+ T+ L+GL ++       N + RW
Sbjct: 243 IIAGMFTIGLLGLAIDIGMNRLNNHLLRW 271