Pairwise Alignments

Query, 228 a.a., IS110 family transposase ISHne3 from Azospirillum sp. SherDot2

Subject, 336 a.a., IS110 family transposase from Erwinia tracheiphila SCR3

 Score = 63.5 bits (153), Expect = 5e-15
 Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 10/226 (4%)

Query: 3   DPARVRYFARATGQRAKNDTIDAALIAEFTASQVALATTPPDPTREELADLVKARRLLV- 61
           +P R R FAR      KND +DA ++A + A +V     PP      L+ L++ R   V 
Sbjct: 84  NPHRSREFARGMDILTKNDQVDAYMLACYGALKVPEPWVPPPENVRHLSALLRRRDAPVT 143

Query: 62  -----DKRVDLRHASAGAPAIAQAVLEEAVEGLTAAIATLEAEIHSRVEAQPELADRVAA 116
                  R++   A+    A+ +++ E  +  L+A    L+A I + ++  PEL      
Sbjct: 144 DSTREKNRLEKCRATDTPLAVTESI-ENVLRNLSAEPEHLDALILTHLDQHPELKKDFDL 202

Query: 117 LQTAPGVGPVVATTLAILLPELGKTTGERMSALVGVTPFDYDSGKS-RGKRHIAG-GRAA 174
           L +   VG  +   + ++L      T E+++A +GV   +  SG S RGK  ++  G   
Sbjct: 203 LTSIKFVGYQLGLNMLVILRGHHFDTAEQVAAFLGVVRVEKYSGTSVRGKPKLSKIGPPE 262

Query: 175 VRHALYIAAEVAATHSKGAIVDVHLQLKWRGKPSRVTLTACMRKLI 220
           +R  LY+A+ +        +  ++ +L  RGK     + A MRKL+
Sbjct: 263 IRAKLYLAS-LCGLRFNPVMKAMYERLCLRGKAKMCAIGALMRKLV 307