Pairwise Alignments

Query, 329 a.a., Cadmium, cobalt and zinc/H(+)-K(+) antiporter from Azospirillum sp. SherDot2

Subject, 314 a.a., cation transporter from Magnetospirillum magneticum AMB-1

 Score =  129 bits (324), Expect = 1e-34
 Identities = 95/314 (30%), Positives = 149/314 (47%), Gaps = 28/314 (8%)

Query: 17  HTHNHGHDRHAGHSHGLGGHHNAPASYDRAFAIGAVLNIGFVVIEAFYGIVANSVALLAD 76
           H H+    RH GH +  GG     A+ +R   I   L +  +V E   G + NS+ALLAD
Sbjct: 4   HVHDLTPWRH-GHQYFSGGE----AAAERRTLIVVALTVVMMVAEITAGTLFNSMALLAD 58

Query: 77  AGHNLSDVLGLLLAWGAAWLTRRRPTH-RHTYGFGSSSILASLLNAVVLLIAVGAIAWEA 135
             H  +    L +A  A    RR     R T+G G   +L    +A+VL +    + WE+
Sbjct: 59  GWHMSTHAGALGIAAFAYGFARRHAEDGRFTFGTGKVGVLGGFASAIVLGMVALLMVWES 118

Query: 136 VGRLTHPEPVEGGIVMWVAAVGIVINAVTAWLFMG-----------GKDA--DLNVKGAY 182
             RL   + +     +WVA +G+V+N V+A +  G           G D   D N++ AY
Sbjct: 119 ASRLREVQTIGFDEALWVAVIGLVVNLVSALILGGDGHTHDHSHDHGHDHHHDHNLRAAY 178

Query: 183 LHMAADAAVSLGVVVAALLIGWTGWLWLDPLVSLAIVAVIVVGTWGLLRESANLALDAVP 242
           +H+ ADA  S+  +VA L   + GW W+DP++ L   AVI   +WGL+ E+  + LD   
Sbjct: 179 VHVVADAVTSVLAIVALLFGKYLGWWWMDPMMGLVGAAVIAKWSWGLMAETGAVLLDHSG 238

Query: 243 EGVSRADVEAYLTGLPSVAAVHDLHIWGLSTTDTALTAHLVRPDAGTDDAFLKEVA--HD 300
           +G    +V A + G  +   + DLH+W +     A    +V       D + + +A  H+
Sbjct: 239 DGSLEQEVRAAIEG-DADNRLADLHLWRVGAGHWAAIVSIVTHQPQPPDYYKRLLAPVHE 297

Query: 301 LKERFGIGHVTIQV 314
           L       HVT+++
Sbjct: 298 L------SHVTVEI 305



 Score = 31.6 bits (70), Expect = 3e-05
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 16  GHTHNHGHDRHAGHSHGLGGHHNAPASYDR--AFAIGAVLNIGFVVIEAFYG 65
           GHTH+H HD    H H     HN  A+Y    A A+ +VL I  ++   + G
Sbjct: 155 GHTHDHSHDHGHDHHH----DHNLRAAYVHVVADAVTSVLAIVALLFGKYLG 202



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 19/93 (20%)

Query: 3   HDHDDANWHDKAQGHTHNHGHDRHAGHSHGLGGHHNAPASYDRAFAIGAVL---NIGFVV 59
           H HD +          H+HGHD H  H+      H    +     AI A+L    +G+  
Sbjct: 156 HTHDHS----------HDHGHDHHHDHNLRAAYVHVVADAVTSVLAIVALLFGKYLGWWW 205

Query: 60  IEAFYGIVANSV------ALLADAGHNLSDVLG 86
           ++   G+V  +V       L+A+ G  L D  G
Sbjct: 206 MDPMMGLVGAAVIAKWSWGLMAETGAVLLDHSG 238