Pairwise Alignments

Query, 378 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 499 a.a., penicillin-binding protein from Agrobacterium fabrum C58

 Score =  230 bits (586), Expect = 7e-65
 Identities = 129/262 (49%), Positives = 169/262 (64%)

Query: 8   AAAIVTMVALSSLSVPAAAKAGRKSAARPVVAEFLMDASSGAVLSARNADVSTYPASLTK 67
           A + V  VAL+  +   AA + + + A P  A  ++DA SG VL   + D   YPASLTK
Sbjct: 22  ATSFVRFVALTLAAAFIAATSVQTAKADPKYAGIVIDAKSGKVLYGEDPDGLRYPASLTK 81

Query: 68  MMTLLLTFEALDRGQLRLDQPLPVSYYATTMAPSRLGVVPGDTIRVEDAILALSTKSAND 127
           MMTL LTFEAL+ G++ LD  + VS  A    PS+LGV  G ++ VE AILAL T+SAND
Sbjct: 82  MMTLYLTFEALNSGRISLDSRVTVSANAAKEPPSKLGVRAGGSVTVEQAILALVTRSAND 141

Query: 128 VAVVLGEAIVGSEAAFAQTMTQRAREIGMRHTVFRNASGLPNREQRTTARDMALLARELV 187
           +A  LGE + GSE  FA+ MT +AR +GM  T +RNA+GLPN  Q TTARD A L   L 
Sbjct: 142 MATALGEHLGGSEDRFARMMTAKARALGMTRTTYRNANGLPNTAQMTTARDQARLGIALR 201

Query: 188 RNHARYYPYFSRSSFDWQNQTVYGHNRLLDQYDGMDGIKTGYIAASGFNLAASASRDGRR 247
           ++  +YY YFS  +F++  Q +  HNRL+    G+DGIKTGY  A+G NLA SA  DGR 
Sbjct: 202 QHFPQYYGYFSTRTFNFGKQVIGNHNRLVGTVKGVDGIKTGYTRAAGSNLATSAQLDGRS 261

Query: 248 LIAVVLGGESARKRDRRIVELM 269
           ++AVVLGG S+  RD  + +L+
Sbjct: 262 IVAVVLGGRSSAARDATMRKLV 283



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 23/121 (19%)

Query: 276 QAPAKPDDLLVSDGKPKARLAAAGT------------------GSWAIQTGVYRSQQVAR 317
           +AP  PD  L+++      +  A T                  G W IQ G    +  AR
Sbjct: 376 RAPVAPDRKLITNSTKVDNIVTASTAASASAAPSVSPRAEAPQGGWVIQIGASPDENSAR 435

Query: 318 QEAETARKRLGSLATAAKPMV---QRSGTQ-YKAQLVGFNAA-AAQSACRSLKKAKTDCL 372
              + A+++ G+   +AKP      + G+Q Y+A+  GF+   AA +AC  LKK    C 
Sbjct: 436 GLLQNAQEKGGAALRSAKPFTVAFSKDGSQIYRARFGGFDGQNAAVNACNVLKKKGVSCW 495

Query: 373 A 373
           A
Sbjct: 496 A 496