Pairwise Alignments

Query, 615 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 573 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  307 bits (787), Expect = 7e-88
 Identities = 193/576 (33%), Positives = 314/576 (54%), Gaps = 12/576 (2%)

Query: 44  SLRSRFLLFATLMIALVLLQGGLSWITAERSHD-MGAATGHSMAALTNDLELLRTIKDMQ 102
           S++ R  +   L+ A++L     +W+T    HD +      S     N LEL+++IK++Q
Sbjct: 2   SIKRRLSIAMALIAAILLFSMAATWMTVSEEHDSLNTMESASDRVTENGLELVKSIKEIQ 61

Query: 103 VLSLALQNKV----ATSASDEINNAKIDVKKIATDYLAAHAGLAKIATERGMTTLGGIDD 158
           +  + +Q  +    AT   D +++      + A  + A  A  A +A+  G+T      D
Sbjct: 62  IHVIQVQQWLTDVSATRGLDGLDDGPAKAAEHAEGFRAEIARAAALASTLGLT------D 115

Query: 159 VEQRIKVAKDSFESLLARSLKGIEDVSQRKGVVPQDLMLEISARVDGLFEHLDRMAEGVK 218
           V++ ++    +F        +  E            LM E     + + + L+ +     
Sbjct: 116 VQEALRETAGAFAPYYDTGKRMAEAFIADGPAGGNRLMGEFDKTAEAITDSLEALVSKTD 175

Query: 219 LLATQDRQTLSETVESNDEITTGLAGVMMTAAAIGALGCAAVTLFVLRGILRPLATLTST 278
             A  +   L+ ++++       L  V++    IG + C    + + RG+ RPL+ +T  
Sbjct: 176 TAAAAEIAKLNRSIDTVRADVDSLKLVVIAGGLIGLVACLGTAIMMTRGVTRPLSAMTDA 235

Query: 279 TAFLANGKLDTPVP-EFRARELGEIAAALRIFRDNLIETGRLKAEREEQEAYADAERTRM 337
              LA G     VP E R+ E+G +A+AL +F+ N IE  RL+ E+   +  A+ ER + 
Sbjct: 236 MHRLAEGDSTVIVPAEGRSDEIGAMASALVVFKGNAIEKRRLEEEQRNADLRAEEERIQA 295

Query: 338 MSDLALAFELSVAGVVENVSSAVTQLRSTAESFSQVAEDATQQATSVADASDLAAGNVSA 397
           M  LA   E  + G++  V+     L+  A+  +  A+    ++ +VA A+   + +V  
Sbjct: 296 MRQLADRLEQRIGGILRTVAGEARVLQQAAKMMTDTADQTNLRSEAVAAATQQTSASVET 355

Query: 398 VAAAAEELSASIRVIGERVGHAARIADRAVIQAEQTNEIVASLGAAASRIDAVVKMISDI 457
           VAAAAEELSAS+  IG +V  +  IA+ AV +A   N  V  L AAA ++  VV++I+ I
Sbjct: 356 VAAAAEELSASVGEIGRQVSQSTGIAEEAVERARHANTKVDGLAAAARQVGDVVQLINSI 415

Query: 458 AGQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLASQTARATADIGEQIASVQKASQEA 517
           A QTNLLALNATIEAARAGEAGKGFAVVA EVK+LA+QTA+AT +I  QI ++Q A+ EA
Sbjct: 416 ASQTNLLALNATIEAARAGEAGKGFAVVASEVKNLANQTAKATEEISAQITAIQAATGEA 475

Query: 518 IGAIRAIGQTIAHISEISSDVAAAVEQQGGATADISRNIQHAATGTQKVTSHIGGVTVAT 577
           +  I+ I + I  +++I++ +A AV QQ  AT +I+RN Q A+TGT+ V  +I GV+ A 
Sbjct: 476 VSDIQGITRVIESMNDIATGIAGAVSQQAAATGEIARNAQQASTGTRDVNHNITGVSAAA 535

Query: 578 REVGTHASNVLGAASGLTAQSDRLRTEVDQFIAKVK 613
            E GT A NVL A++ L+ ++  +  ++ +F+A+++
Sbjct: 536 GETGTAAKNVLNASTTLSQEAVAMERQLAEFLAQLR 571



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 54/259 (20%), Positives = 98/259 (37%), Gaps = 23/259 (8%)

Query: 366 TAESFSQVAEDATQQATSVADASDLAAGNVSAVAAAAEELSASIRVI-GERVGHAARIAD 424
           TAE+ +   E A    T  A A+++A  N S     A+  S  + VI G  +G  A +  
Sbjct: 159 TAEAITDSLE-ALVSKTDTAAAAEIAKLNRSIDTVRADVDSLKLVVIAGGLIGLVACLGT 217

Query: 425 RAVIQAEQTNEIVASLGAAASRIDAVVKMISDIAGQTNLLALNAT---------IEAARA 475
             ++    T  + A   A     +    +I    G+++ +   A+         IE  R 
Sbjct: 218 AIMMTRGVTRPLSAMTDAMHRLAEGDSTVIVPAEGRSDEIGAMASALVVFKGNAIEKRRL 277

Query: 476 GEAGKGFAVVAGEVKSLASQTARATADIGEQIASVQKASQEAIGAIRAIGQTIAHISEIS 535
            E  +   + A E +    Q  R  AD  EQ   +    +   G  R + Q    +++ +
Sbjct: 278 EEEQRNADLRAEEERI---QAMRQLADRLEQ--RIGGILRTVAGEARVLQQAAKMMTDTA 332

Query: 536 SDVAAAVEQQGGATADISRNIQHAATGTQKVTSHIGGVTVATREVGTHASNVLGAASGLT 595
                  E    AT   S +++  A   +++++ +G       E+G   S   G A    
Sbjct: 333 DQTNLRSEAVAAATQQTSASVETVAAAAEELSASVG-------EIGRQVSQSTGIAEEAV 385

Query: 596 AQSDRLRTEVDQFIAKVKR 614
            ++    T+VD   A  ++
Sbjct: 386 ERARHANTKVDGLAAAARQ 404