Pairwise Alignments

Query, 615 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 568 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  301 bits (772), Expect = 4e-86
 Identities = 196/515 (38%), Positives = 299/515 (58%), Gaps = 22/515 (4%)

Query: 105 SLALQNKVATSASDEINNAKIDVKKIATDYLAAHAGLAKIATERGMTTLGGIDDVEQRIK 164
           ++AL++ V T+    ++    D+ ++A  Y  +   L  +          G+ D+E   +
Sbjct: 67  AIALRDVVLTTDPATLSLVLADIDRLAAFYEDSAKPLDAM--------FAGMTDIEPEER 118

Query: 165 VAKDSFESLLARSLKGIEDVSQRKGVVPQDLMLEISARVDGLFEHL-DRMAEGVK----L 219
               S + + A+SL  I      K V+      +++A   GL +       E +K     
Sbjct: 119 QLLASIKEIEAKSLPAI------KTVITARKANDMAAAQKGLMQDARPAFTEWLKRINAF 172

Query: 220 LATQDRQTLSETVESNDEITTGLAGVMMTAAAIGALGCAAVTLFVLRGILRPLATLTSTT 279
           +  Q+ +  +    + D +  G   +M++      L   A  L+ +   LRPL  LT+  
Sbjct: 173 IDLQEHKNQTIAARARD-VAKGFQTLMLSLCGAALLMAGAFGLWTVAA-LRPLRRLTNAM 230

Query: 280 AFLANGKLDTPVPEFRAR-ELGEIAAALRIFRDNLIETGRLKAEREEQEAYADAERTRMM 338
             LA G L   VP   ++ E+G+I  A+ +F+ N +E    +  + E E  A+  +   M
Sbjct: 231 LTLARGDLTVTVPASDSKDEIGQITGAVEVFKANAVEADAFRRRQAEAEHAAEERKRAEM 290

Query: 339 SDLALAFELSVAGVVENVSSAVTQLRSTAESFSQVAEDATQQATSVADASDLAAGNVSAV 398
           + LA  FE  V GVV++V+S+ T++R+ A+S +  A+    QAT+VA AS+ A+ NV  V
Sbjct: 291 AALADRFENEVKGVVDSVASSSTEVRALAKSLATTADHTETQATTVAAASEQASVNVQTV 350

Query: 399 AAAAEELSASIRVIGERVGHAARIADRAVIQAEQTNEIVASLGAAASRIDAVVKMISDIA 458
           AAAAEEL+ASI  IG ++G ++R A +A  QA+ TN IV  L + A++I  VV +I+ IA
Sbjct: 351 AAAAEELAASISEIGRQIGESSRKAKQAADQADGTNRIVDGLSSKANQIGDVVNLINSIA 410

Query: 459 GQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLASQTARATADIGEQIASVQKASQEAI 518
           GQTNLLALNATIEAARAGEAGKGFAVVA EVKSLA+QTA+AT DI +QIA +Q A+ +A+
Sbjct: 411 GQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTAKATGDISQQIAEIQTATADAV 470

Query: 519 GAIRAIGQTIAHISEISSDVAAAVEQQGGATADISRNIQHAATGTQKVTSHIGGVTVATR 578
            AI++I  TI  ++ I   +A AV+ Q  AT +I+RN+Q AA GT +V+S IGGV  A  
Sbjct: 471 EAIQSIAATIGEVNVIVGTIAQAVDGQNAATMEIARNVQQAAAGTNEVSSSIGGVLQAAS 530

Query: 579 EVGTHASNVLGAASGLTAQSDRLRTEVDQFIAKVK 613
           E G+ AS +L ++  L+ Q++ L T+VD+F+  V+
Sbjct: 531 ETGSGASRLLSSSGELSKQAELLHTQVDRFLGSVR 565



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 56/283 (19%), Positives = 107/283 (37%), Gaps = 30/283 (10%)

Query: 336 RMMSDLALAFELSVAGVVENVSSAVTQLRSTAESFSQVAEDATQQATSVADASDLAAGNV 395
           R  +D+A A +    G++++   A T+      +F  + E   Q  T  A A D+A G  
Sbjct: 142 RKANDMAAAQK----GLMQDARPAFTEWLKRINAFIDLQEHKNQ--TIAARARDVAKGFQ 195

Query: 396 S---AVAAAAEELSASIRVIGERVGHAARIADRAVIQAEQTNEIVASLGAAASRIDAVVK 452
           +   ++  AA  ++ +  +         R    A++   +  ++  ++ A+ S+ +    
Sbjct: 196 TLMLSLCGAALLMAGAFGLWTVAALRPLRRLTNAMLTLAR-GDLTVTVPASDSKDE---- 250

Query: 453 MISDIAGQTNLLALNAT-IEAARAGEAGKGFAVVAGEVKSLASQTARATADIGEQIASVQ 511
            I  I G   +   NA   +A R  +A    A    +   +A+   R   ++   + SV 
Sbjct: 251 -IGQITGAVEVFKANAVEADAFRRRQAEAEHAAEERKRAEMAALADRFENEVKGVVDSVA 309

Query: 512 KASQEAIGAIRAIGQTIAHISEISSDVAAAVEQQGGATADISRNIQHAATGTQKVTSHIG 571
            +S E     +++  T  H    ++ VAAA EQ              A+   Q V +   
Sbjct: 310 SSSTEVRALAKSLATTADHTETQATTVAAASEQ--------------ASVNVQTVAAAAE 355

Query: 572 GVTVATREVGTHASNVLGAASGLTAQSDRLRTEVDQFIAKVKR 614
            +  +  E+G         A     Q+D     VD   +K  +
Sbjct: 356 ELAASISEIGRQIGESSRKAKQAADQADGTNRIVDGLSSKANQ 398