Pairwise Alignments

Query, 506 a.a., Ribonuclease J from Azospirillum sp. SherDot2

Subject, 571 a.a., Ribonuclease J1 from Azospirillum sp. SherDot2

 Score =  486 bits (1252), Expect = e-142
 Identities = 237/446 (53%), Positives = 311/446 (69%), Gaps = 2/446 (0%)

Query: 46  VPGKDEILFLPLGGCSRIGMNMALYGHAGKWLIVDAGVAFVGDEMPGIDSLMADPAFIEE 105
           VP    + FLPLGG   IGMN+ LY H GKWL+VD G++F  D MPG+D +M DPAFI  
Sbjct: 20  VPEDGALYFLPLGGSGEIGMNLNLYCHQGKWLMVDLGISFADDTMPGLDVIMPDPAFIAA 79

Query: 106 RMQDVVGLVVTHAHEDHIGAIHHLWPRLRCPIYASPFASHIIRDRLKEKGAHRAAKVQTF 165
           R  D+VGLV+THAHEDH+GA+ +LWP LRCP+Y +PF +  +R +L EKG      +   
Sbjct: 80  RRNDLVGLVLTHAHEDHLGAVQYLWPELRCPVYCTPFTAAFLRAKLHEKGLSSTVPIHEI 139

Query: 166 EIGDTLSIGPFRIETIAVTHSIPEPMSLAIRTAAGTVLHTGDWKFDPNPLVGRSTDFAAL 225
            +G T+ +GPF +E + +THSIPEP +LAIRT+AGT+LHTGDWK DP+PLVG + D   L
Sbjct: 140 PLGGTVEVGPFSVEYVTMTHSIPEPNALAIRTSAGTILHTGDWKLDPDPLVGETADEERL 199

Query: 226 KRLGDEGLLAMMCDSTNADVPGSTGSEADARAGLIGAFAN-RSGAIAVTGFASNVARMTA 284
           + +GDEG+LA++ DSTNA VPG++GSEA  R  L+  F   R   IAV+ FA+NVAR+ +
Sbjct: 200 RAIGDEGVLALVGDSTNALVPGASGSEATVRDALMELFGRYRDRRIAVSCFATNVARLES 259

Query: 285 VAEAAAAVGRKVVLVGRSMLRMEKAAQACGYLDHVPDFMDVREASWTPRDNLVFLCTGSQ 344
           +A AAAA  R V LVGRS+ R+ +AA+  GYL  VP F+   +AS+ PR+ LV +CTGSQ
Sbjct: 260 IAAAAAAHDRHVALVGRSLWRINEAARTTGYLADVPKFLSEHDASYLPREKLVLICTGSQ 319

Query: 345 GEERAALSRLARNEHRELWLEEGDTVIFSARIIPGNEEALAEIHGHLRGMGVEIVTPAEA 404
           GE R+AL+R+A N+H ++ L  GD VIFS+R IPGNE A+  +   L   GVE+VT  EA
Sbjct: 320 GEPRSALARIAANDHPQVTLSRGDVVIFSSREIPGNERAIGRMQNQLVTQGVELVTADEA 379

Query: 405 PVHVSGHPKRDDLARMYGLVRPRFAVPVHGTIEHMEAHARLARSCGVERALVPEDGDILR 464
            VHVSGHP RD+L RMY  VRP  AVPVHG   H +AHA LA  C +  ++VP +G+ILR
Sbjct: 380 SVHVSGHPARDELVRMYQWVRPHIAVPVHGEQRHQQAHAALAEDCQIPHSIVPANGEILR 439

Query: 465 I-AREGTRVIGRIEPKRLANTGRELI 489
           +   EG RV+  +   R+A  G+ L+
Sbjct: 440 LDGAEGARVVAHVRAGRMAVDGKRLV 465