Pairwise Alignments

Query, 1265 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  318 bits (814), Expect = 2e-90
 Identities = 239/705 (33%), Positives = 338/705 (47%), Gaps = 47/705 (6%)

Query: 563  KRFEAELQRQAADMCALAEGLDAAREEADALRARAEAATQAKSEFLAAMSHEIRTPMNGI 622
            +  +  + +   D+    E ++    E D  R  A  A++ KSEFLA MSHEIRTP+NGI
Sbjct: 245  EELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTPLNGI 304

Query: 623  QGMTELLFDTPLTDEQRQFAQAIRSSSNALLTIINDILDISKLEAGRVTIETLPFDAADL 682
             G T LL  + +T  Q  +   I  S++ LL IIN+ILD SK+EAG++ ++++PF+  DL
Sbjct: 305  LGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDL 364

Query: 683  VEGVVELLTPRAHEKGIEIGFYIDPLLRRTLLGDPTRIRQILVNLVGNAVKFTDRGSVAV 742
            ++  + +L P AH K +E+   I      +L+GDP R++QIL NLV NA+KFT  G++ V
Sbjct: 365  IQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREGTIVV 424

Query: 743  ELEVLDATDAHLVLRITVTDTGIGIPAEAMPTLFNKFQQVDGSITRKFGGTGLGLAICRQ 802
               + D  +    LRI+V DTGIG+  + + TLF  F Q D S+ R+ GGTGLGL I ++
Sbjct: 425  RAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLVISKR 484

Query: 803  LSELMGGSIAVESSLGIGSRFLVDLPLALSE---EALPPAEQPLAGRSVLVVDDLAVNRR 859
            L E MGG I V+S+ G GS+F + L L  +    EALPP  QPL GR   +VD   + R+
Sbjct: 485  LIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPP--QPLLGRRAAIVDGHELARQ 542

Query: 860  VLASMLDSLGAWPTCVESGPDALEALRRGAAGGRPFDVVLADQTMPGMGGDTLLATVAGD 919
             L   L+  G   +   S    L+ ++  +  G PF+  +    +  +  + L       
Sbjct: 543  ALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQL----GHY 598

Query: 920  PALIGTRRVLIVTLGPAVRG-------ESGPAPGLAHATLNRPLRQSSLAACLTGLFAAA 972
               +       V L P            +G    L+  T  R LR+         L    
Sbjct: 599  HQQLERYHCQCVVLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRL--------LLELV 650

Query: 973  APAASAVPSAEAKVEDVLRRGRILLAEDNRTNQLFATTLLRRLGYTVEVAEDGEQAVAAA 1032
             P     P AE    +  RR +IL  +DN  N L   TLL  LG  V    +G  AV A 
Sbjct: 651  QPRR---PLAEGSNPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAV 707

Query: 1033 CRGGLDLVLMDVQMPGMDGLEAAQAIRARGGALAG--LPIIALTADAMPGTRELCLRAGM 1090
                 DLVLMDVQMPGMDG    + IR      +G  LPI+ALTA AM   +   L +GM
Sbjct: 708  QEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGM 767

Query: 1091 SDYLTKPISRAGLLSALDRWIGTAEPPAAAAEAGGGSGKGSAAVNDDGSGEDGEALDEAV 1150
             DYLTKPIS   L   + +W G +      A+A   +      V D    E+G  L    
Sbjct: 768  DDYLTKPISERQLAQVVMKWTGLSLGTPQQAQAELLTNGDELKVLDP---EEGLRLAAGK 824

Query: 1151 LDDLVETVGADSLALIVDSFLEDVSHRLERLSAMDDAMPAGTVDLRALAQEAHDLSSLAG 1210
             D     + AD L++++ S   D      R +   D       D   L ++ H L+  + 
Sbjct: 825  AD-----LAADMLSMLLASL--DTDREAIRAARAAD-------DRNGLIEQVHRLNGASR 870

Query: 1211 SFGGMAVMHIAWRMEVLCRNGDRDQAARLLPVLLREAARLERSLR 1255
              G   +     R E L +  D  QA + L  L    +RL    R
Sbjct: 871  YCGVPQLRAACQRSETLLKQ-DNPQAQQALDELDSAISRLAAQAR 914