Pairwise Alignments

Query, 1168 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1171 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  553 bits (1426), Expect = e-161
 Identities = 355/1027 (34%), Positives = 555/1027 (54%), Gaps = 66/1027 (6%)

Query: 4    WFILAASLAYLLSLFAIAWYGDRTGPHGSERRTPWLYALSFGVYCTSWTFYGAVGRAATG 63
            W +      YLL+LFA+A++GD+       R+ P LY+L  GV+CTSW F+G   +AA  
Sbjct: 5    WTVGTIVGCYLLALFALAFWGDKR--LRDNRQHPILYSLGLGVHCTSWAFFGTTSQAAQY 62

Query: 64   GFYFLPIYIGPILMIGLGWPVLARIVRVAKSENVVSISDFLSARYGKSRSLAALVTVAAV 123
            G+  +P Y+G +L +   +PV+  I R+ +  N+ S++D +S +Y  S  +AAL+T+   
Sbjct: 63   GWAVIPTYLGIMLTMAFAFPVVLHISRLCQQHNISSLADLISLKYQHSHLIAALITLLCF 122

Query: 124  IGLLPYIALQLKAISVSFEILAGASLGTDLSQMPGGTALMAALLMAAFAILFGVRSVSAN 183
             G++PYIALQL AI+ S  +L       D        ++  A+L+A FAI+FG R+++  
Sbjct: 123  FGVVPYIALQLDAITKSINLLTD-----DAHTSTPWLSIYVAILLALFAIIFGTRTLNLT 177

Query: 184  EHHRGLMMAIAAESVVKLAAALGVGGAIALSVFGDPATFFDAAVRHPGFLELIRMDSIGT 243
            + H GL++ IA ESV+KL A   VG  +   +F         A  +    E+I  DS   
Sbjct: 178  DKHPGLLLTIAFESVIKLVALCAVGVFVCFYLFDGVLDLVSNAASNASAREVIYADSAPW 237

Query: 244  DWWVACLLSGLAILCLPRQFHVAVVENTHGGDVRSSAKLFPAYLVAINIFVLPVALAGLM 303
             +    +L   ++  LPRQFH+  VE    G++R++  LFP YL  + +F++P+ALAG M
Sbjct: 238  VYVSHVVLGVCSMFVLPRQFHMNFVEQNGEGELRTARWLFPLYLFGMTLFIIPIALAGKM 297

Query: 304  LFPDGTTNADTFMVSIPLSQGWPWLALAAFIGGLSAATSMILVEMVALSTMICNDVAVPL 363
            L P  T++ D +++++PL      L+  AFIGGLSA TSM++V  +AL  MI N+V  PL
Sbjct: 298  LLPVDTSS-DAYVLALPLYAENIALSSFAFIGGLSATTSMVIVATLALGIMISNNVVTPL 356

Query: 364  LMALRPDDRRLRDDPAGILLLVRRSAVIVLVLLSYGCYRLIGPAFPLATIGMMSFTAVAQ 423
             +  R      R      +L +RR  V+V++ ++   +  I  A PL   G+++   +AQ
Sbjct: 357  WLKARLKTSPNRSMQPNKILSIRRITVVVVLSIALWYHLNISQAAPLVKSGVIAIALLAQ 416

Query: 424  FAPALLGGLIWSRASRSGAFAGICAGFVGWAYTMLLPSFADAGWLASSALREGPFGLTGL 483
              PAL+ GL W++++++ A   +  GF  WA  +L PS   + +  + A  +   GL   
Sbjct: 417  CMPALMFGLYWTKSNKAAAICALLVGFTCWAAFLLYPSLLSSYYF-NPAPTDQALGL--- 472

Query: 484  SPVALAGIAGIDPLTNAALWSLGPNLLLFVVVSLLTRPSTLERQQAARFMSLRRASDGEP 543
                  G A          +SL  N L FV V+L+T      R+      +L    D   
Sbjct: 473  ------GFA----------FSLLANCLTFVTVALIT-----SRRGTKPNNTLLTDHDT-- 509

Query: 544  HGPRGATLADLHDLALRYVGQSRADAAFRRFTGVADGDLRTALLMRTDGEA-IQLTERLL 602
              PR   L  + DL +    +    A   +       D+  A       +A I    +LL
Sbjct: 510  --PR--LLVKVRDL-IALTERVLESATHSQLVKQLSVDVNRAASSGYASQALIDRVNKLL 564

Query: 603  AGAVGSASARVVVAGLLSDRRLSRTDARSIIDEASRAILKQHELLRATVENVPQGIAVFD 662
            A  VG+ SAR+++  +      S  +    ++EAS++    HE+L+++V+N+ QGI+V D
Sbjct: 565  AAQVGAPSARILLGAIADTGSDSFPELVDWVEEASQSFQFNHEVLQSSVQNIEQGISVLD 624

Query: 663  EDWRVATWNNQFVVLLELPDGFVQVGTSLQDIVGLIARRGEYGRNGEIETLLERRSDPRR 722
            +  ++  WN ++V L   P GF++ G  + DI+   A RG +  +      +E+R     
Sbjct: 625  DKLQLLAWNERYVELFAYPKGFLKAGMPITDILSYNANRGLFSPSS-----IEKRVSYML 679

Query: 723  RNKPDVYERVRPDGTVLEIATNPMPGQRPGGGGGFVAVYTDVTERHRAAAALREANETLE 782
                  + R +PDG V+E+   P+PG      GG+V  Y+D+TE       L  A E LE
Sbjct: 680  EGTRHKHIRKQPDGKVIELNGAPLPG------GGYVTTYSDITEYIAIQKELESAKEDLE 733

Query: 783  RRIEERTHALSEAKAEAERANRGKTRFLAAASHDLLQPLHAARLFLSALGERNGDSAIRQ 842
             R+ +RT  L EAK  A++AN  KT+FLAAA HDL+QP +AA LF S L ++   S +  
Sbjct: 734  ARVAQRTAELEEAKQHADKANESKTKFLAAAGHDLMQPFNAATLFASMLSKKTQGSELAT 793

Query: 843  ID----TSLRSVETILGDLLDVSKIDSGVVKPNPVPMRIEELLKPLGEEFTVLASRHGLG 898
            +      SL + +++L  LLD++K+D+GV+ P      + ++L  L +EF+V+A + G+ 
Sbjct: 794  LSEGVVNSLDNAQSLLSMLLDMTKLDAGVLTPQKTEFPVSDMLSSLVQEFSVIAKQKGIE 853

Query: 899  LRVVDCSAIVRSDPTLLRRILQNYLANAVRYTRTGRILLGCRR-----RGSFLSIEVWDT 953
            LR V    +V SD  LLRR+LQN L+NAVRYT  GRIL+G RR         + + V+DT
Sbjct: 854  LRYVPTRVMVYSDKVLLRRVLQNLLSNAVRYTAKGRILVGVRRTRVTNTEQVIKLCVYDT 913

Query: 954  GPGIPEHKVPEIFMEFRQLDNDGDDRGDRGKGLGLGLAIVERLAGILGHTVQVRSKVGRG 1013
            G GI +H+  EIF EF QL+++     ++G+G+GLGL IV+++  +LGH V + S   +G
Sbjct: 914  GLGIADHQQHEIFSEFHQLESN-----NKGEGIGLGLTIVDKICRLLGHEVGLTSSPNKG 968

Query: 1014 SAFSVLV 1020
            S FSV V
Sbjct: 969  SCFSVAV 975



 Score = 53.5 bits (127), Expect = 1e-10
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)

Query: 1041 LRGVLVLCLENEPAIARATEDLLSSWSCRVVTAVAPDLALAKLEGRTPDVILTDYHLDRS 1100
            L+    L +EN+  +A A   LL  W     T +A    ++ +     DV++ DYHL+  
Sbjct: 1052 LKDTRFLLVENDEQVANAMCTLLRDWGGST-TLIAGGAEVSSISQEHFDVLVADYHLNYG 1110

Query: 1101 LTGVEALRTLRASLGSDIPAAVVTADRDAAVREDIEAAGCRLLYKPVRPGALRALLGQLL 1160
             TG +    L  +  S     +VTA+R   +RE+        L KP++P AL+ LL Q L
Sbjct: 1111 ETGFDVAAILSENNVSFALKILVTANRSNDIREEAAEQQFSYLPKPLKPAALKRLLKQSL 1170