Pairwise Alignments
Query, 394 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 896 a.a., hypothetical protein from Pseudomonas sp. S08-1
Score = 66.2 bits (160), Expect = 4e-15
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 50 NFTYDPLTKALTGGTVTSVTNASNGVLDVAVSDLNLPVATALNWASTGTSPEAIRAA--- 106
N + + L L G ++ N S+G V+ + + V +LN TS +A + +
Sbjct: 692 NLSGNNLNNVLVAGIGNNILNGSDGTDTVSYTHASSAVTVSLN----STSAQATKGSGSD 747
Query: 107 LLGGNDSLSGSELNDTLRGYAGDDTIKGGMGDDLLDGGSGINVIDGGDGSNDTVARHASL 166
L ++L+GS+ ND+L G A +T+ GG G+D L GG+G +++ GG G NDT +A L
Sbjct: 748 TLISIENLAGSQYNDSLTGNAASNTLNGGAGNDRLIGGAGKDLLIGGAG-NDTFVINA-L 805
Query: 167 ADSGAVKYNGEIY-------VIDANGYDRLTNVE----FIQYTDQTVAGASA---PVFDG 212
+DSG N ++ ID + D T V+ F Q D A +A + DG
Sbjct: 806 SDSGLTSDNWDVIKDFMSGDKIDLSRLDADTTVDGNNVFTQIIDSAAAFTAAGQLRLTDG 865
Query: 213 LSYIAANPDLAAAYGM 228
+ Y + D A + +
Sbjct: 866 VLYGNIDGDADAEFAI 881
Score = 58.5 bits (140), Expect = 7e-13
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 20 TNIQGGTITGATPDQLVITYPGNRFTDLRGNFTYDPLTKALTGGTVTSVTNASNGVLDV- 78
TNI+ G + L+ GN L L G +V N G V
Sbjct: 364 TNIENGRVLAGDTSSLI------------GN----SLNNILYAGAGNNVLNGGAGSDTVS 407
Query: 79 ---AVSDLNLPVATALNWASTGTSPEAIRAALLGGNDSLSGSELNDTLRGYAGDDTIKGG 135
A S + + +A+A A+ G+ + + A ++L+GS ND+L G A D+T+ GG
Sbjct: 408 YLYASSAVTVTLASAAAQATGGSDSDMLIAI-----ENLTGSSYNDSLTGDAADNTLSGG 462
Query: 136 MGDDLLDGGSGINVIDGGDGSNDTVARHAS 165
GDD+L+G +G + + GGDGS+ +AS
Sbjct: 463 AGDDILNGRAGADKLIGGDGSDIYYVDNAS 492
Score = 54.7 bits (130), Expect = 1e-11
Identities = 75/285 (26%), Positives = 114/285 (40%), Gaps = 56/285 (19%)
Query: 6 AGSQSSLNTD-ALDVTNIQGGTITGATPDQLVI-TYPGNRFTD-LRGNFTYDPLTKALTG 62
A + S++N A+ + GG G T + I G+ F+D L GN + L A
Sbjct: 190 AAATSAVNVSLAISTAQVTGG---GGTDTLISIENLTGSDFSDTLAGNSGNNTLNGAAGS 246
Query: 63 GTVTSVTNASNGVLDVAVSDLNLPVATALNWASTGTSPEAIRAALLGGNDSLSGSELNDT 122
TV+ T S ++L ++TA GT L ++LSGS ND
Sbjct: 247 DTVSYATATS-------AVHVSLAISTAQVTGGGGTDT-------LISIENLSGSAHNDR 292
Query: 123 LRGYAGDDTIKGGMGDDLLDGGSGINVIDGGDGS-----------------------NDT 159
L G + + GG G+D+L+GG+G + + GGDGS NDT
Sbjct: 293 LTGDDAANKLSGGAGNDILNGGAGADKLIGGDGSDIYYVDSTSDVISETNANLSIGGNDT 352
Query: 160 VARHASLADSGAVKYNGEIYVIDANGY--DRLTNVEFIQYTDQTVAGASAPVFDGLSYIA 217
V + S G NG + D + + L N+ + + + G + D +SY+
Sbjct: 353 VYSYLSEYTLGTNIENGRVLAGDTSSLIGNSLNNILYAGAGNNVLNGGAGS--DTVSYLY 410
Query: 218 ANPDLA---------AAYGMDSEAAFDHYRSFGWSEGRSLTFNAA 253
A+ + A G DS+ G S SLT +AA
Sbjct: 411 ASSAVTVTLASAAAQATGGSDSDMLIAIENLTGSSYNDSLTGDAA 455
Score = 52.8 bits (125), Expect = 4e-11
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 50 NFTYDPLTKALTGGTVTSVTNASNGVLDV----AVSDLNLPVATALNWASTGTSPEAIRA 105
+ T + L L G ++V N G V A S + + +A++ A+ G+ + + A
Sbjct: 535 SLTGNSLNNILYAGAGSNVLNGGTGSDSVSYLYASSAVTVTLASSAAQATGGSGSDTLIA 594
Query: 106 ALLGGNDSLSGSELNDTLRGYAGDDTIKGGMGDDLLDGGSGINVIDGGDGSN 157
+SL GS ND L G + + + GG+G+D+L+GG+G + + GG+GS+
Sbjct: 595 I-----ESLIGSNYNDKLTGNSASNRLSGGLGNDVLNGGAGSDKMIGGEGSD 641
Score = 43.1 bits (100), Expect = 3e-08
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 70 NASNGVLDVAVSDLNLPVATALNWASTGTSPEAIRAALLGGNDSLS------GSELNDTL 123
N+SN +L+ A + ATA + + + + GG D+L GS+ NDTL
Sbjct: 110 NSSNNILNGAAGSDTVNYATATSAVNVSLAISTAQVTGGGGTDTLISIENLIGSDFNDTL 169
Query: 124 RGYAGDDTIKGGMGDDLLDGGSGINVIDGGDGSNDTVARHASLADSGAVKYNGEIYVIDA 183
G +G++T+ G G D ++ + T A + SLA S A V
Sbjct: 170 AGNSGNNTLNGAAGSDTVNYAAA------------TSAVNVSLAISTA-------QVTGG 210
Query: 184 NGYDRLTNVEFIQYTD--QTVAGAS 206
G D L ++E + +D T+AG S
Sbjct: 211 GGTDTLISIENLTGSDFSDTLAGNS 235
Score = 38.5 bits (88), Expect = 8e-07
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 19/190 (10%)
Query: 5 SAGSQSSLNTDA---LDVTNIQGGTITGA-TPDQLVITYPGNRFTD-LRGNFTYDPLTKA 59
SA +Q++ +D+ + + N+ G + + T D T G D L G D L
Sbjct: 421 SAAAQATGGSDSDMLIAIENLTGSSYNDSLTGDAADNTLSGGAGDDILNGRAGADKLIGG 480
Query: 60 LTGGTVTSVTNASNGVLDVAVSDLNLPVATALNWASTGTSPEAIRAALL--GGNDSLSGS 117
G + V NAS+ V + S T ++ S T I + GGN SL+G+
Sbjct: 481 -DGSDIYYVDNASDLVSETNASLSTGGSDTVYSYLSKYTLGANIENGRIVAGGNASLTGN 539
Query: 118 ELNDTLRGYAGDDTIKGGMGDD---LLDGGSGINV--------IDGGDGSNDTVARHASL 166
LN+ L AG + + GG G D L S + V GG GS+ +A + +
Sbjct: 540 SLNNILYAGAGSNVLNGGTGSDSVSYLYASSAVTVTLASSAAQATGGSGSDTLIAIESLI 599
Query: 167 ADSGAVKYNG 176
+ K G
Sbjct: 600 GSNYNDKLTG 609
Score = 37.0 bits (84), Expect = 2e-06
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 63 GTVTSVTNA--SNGVLDVAVSDLNLPVATALNWASTGTSPEAIRAALLGGNDSLSGSELN 120
G V S TNA S G D S L S GT+ E R L G+ +LSG+ LN
Sbjct: 649 GDVVSETNADASTGGTDTVYSYLTS--------YSLGTNIENGRI-LAAGSANLSGNNLN 699
Query: 121 DTLRGYAGDDTIKGGMGDDLLDGGSGINVIDGGDGSNDTVARHASLADSGAVKYNGEIYV 180
+ +L G G N+++G DG++ HAS A + ++ +
Sbjct: 700 N------------------VLVAGIGNNILNGSDGTDTVSYTHASSAVTVSLN-STSAQA 740
Query: 181 IDANGYDRLTNVEFI---QYTDQTVAGASAPVFDGLSYIAANPDLAAAYGMD 229
+G D L ++E + QY D A++ +G A N L G D
Sbjct: 741 TKGSGSDTLISIENLAGSQYNDSLTGNAASNTLNG---GAGNDRLIGGAGKD 789
Score = 28.9 bits (63), Expect = 6e-04
Identities = 41/169 (24%), Positives = 58/169 (34%), Gaps = 16/169 (9%)
Query: 21 NIQGGTITGATPDQLV------ITYPGNRFTDLRGNFTYDPLTKALTGGTVT-----SVT 69
NI+ G I L I Y G L G D ++ VT S
Sbjct: 522 NIENGRIVAGGNASLTGNSLNNILYAGAGSNVLNGGTGSDSVSYLYASSAVTVTLASSAA 581
Query: 70 NASNGVLDVAVSDLNLPVATALNWASTGTSPEAIRAALLGGNDSLSGSELNDTLRGYAGD 129
A+ G + + + + N TG S + LG ND L+G +D + G G
Sbjct: 582 QATGGSGSDTLIAIESLIGSNYNDKLTGNSASNRLSGGLG-NDVLNGGAGSDKMIGGEGS 640
Query: 130 DTIKGGMGDDLLDGGSGINVIDGGDGSNDTVARHASLADSGAVKYNGEI 178
DT D++ + D G DTV + + G NG I
Sbjct: 641 DTYYVDNAGDVVSETNA----DASTGGTDTVYSYLTSYSLGTNIENGRI 685