Pairwise Alignments

Query, 725 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 673 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  297 bits (761), Expect = 1e-84
 Identities = 233/712 (32%), Positives = 357/712 (50%), Gaps = 62/712 (8%)

Query: 24  LRAKLMIAIGVVLSGTLVAAAVALIGYANVRTTIDAIVGQAVPAMTEGMAVAQQAERLVA 83
           +RA++ +  G+VL   L+ A +A+IG   + +  D +         E   V+    R+  
Sbjct: 12  VRARIFLGFGLVL---LLLALIAIIGANGLSSATDQV--------EEFSRVSDNTVRVAV 60

Query: 84  LAPALTSADSAA---AREAVSARIAAAKEEFNARLSRLRATGSAGSQLAAIEEASQGLLG 140
           L    T A       A E  +A   AA+E+  A++ +  A  +  +   A  EA   + G
Sbjct: 61  LVGDFTEARRNVRNYANEGDAASAKAAREQL-AKVRKDIAEITGKTVNPARREALTKMSG 119

Query: 141 NLAQLDQAAAERVALGAERMAMMPKVMAAEAEIQKFAAPWTSVLNNDEEQARSTLAEPDA 200
            +        +  A   E+MA       A A  +K      SVL     +A +++     
Sbjct: 120 EI--------DGYAANFEKMA------EARAAKEKLINEQLSVLGQQAREAMASIVSGAM 165

Query: 201 APAAMREAAATLNKVMAQKKPLAIVTAEAANIRNMLMEASTTRDDQRLAIIETRVGVSLA 260
           A      AA +              T EA     +L    T+    +LA    +   +  
Sbjct: 166 ASGDFEAAAQSSQ------------TQEALMQARLLASRFTSTPTPKLADASRQQMTAFL 213

Query: 261 GLSNNAEA-----LPERLAAVATKQAELLNGFSIGENSMVTLRQKELTIEGYFTQLLESN 315
           GL ++ E        +RLA  A  QAE    ++     MV    + + +E     ++  N
Sbjct: 214 GLVHSLEERLRDPARKRLAKDAAAQAE---SYAAAFGQMV---DRTMQVEQLANTVMR-N 266

Query: 316 HALTTTLAKGISALVDGQKSSIAEASAATTHMLDNSRMMQIAVAGISILVSILVVWLYIG 375
            A+   +AK  + +   Q   +      T   +  + +  + V+G ++ V +L+  L  G
Sbjct: 267 EAME--IAKLANQVRTAQVERLDTLKGQTISGMGRATVSGLVVSGAALAVGLLLALLIAG 324

Query: 376 RIV--IRRMMDLKTGMGRIAAGDLDAEIALT-GKDEIAEMGAALLVFRDTAREVETARTA 432
            IV  ++ M D  T   ++A+GD    I  T  KDEI EM  A+ VF+D     E     
Sbjct: 325 SIVTPVQAMTDTMT---KLASGDKTVAIPATENKDEIGEMARAVQVFKDGLIRAEQLEAE 381

Query: 433 AEAERQRAAGERRQTMLSLADQFENGVKTVVETVSAAATQMHQTAAGMVATADDTSRQAG 492
           A A+++R     R+  L  AD F+  ++ V+  V      +H T+  + A A+ TSRQ+ 
Sbjct: 382 ARADQEREVARGRKRELLTAD-FDVMIRRVIAKVDNTVQNVHSTSTSLHAAAEQTSRQSA 440

Query: 493 NAAEAAETASVNVDGAASAAHELSQSISEIARQVTESATIAAKAANEAERTDSTMRDLNE 552
             A AAE A+ N+   ASAA EL  S  EI+R+V ++  I  +A +  +  D+T+  L+ 
Sbjct: 441 AVAAAAEQATANIQTVASAAEELGASTHEISRRVQDTTRITQEAVDGVQTADATVEGLST 500

Query: 553 AASRIGAVLDLISDIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKQLASQTAKATEQ 612
           AA +IG ++ LI+DIA QTNLLALNATIEAARAGEAGKGFAVVA+EVK LA+QTAKAT +
Sbjct: 501 AAQKIGEIVSLINDIAAQTNLLALNATIEAARAGEAGKGFAVVANEVKHLATQTAKATSE 560

Query: 613 IAGQIGAMQQATGEAVGAIRSIGLTIGRLNDIAASIAAAVEEQGAATSEIARNVQQAAGG 672
           IA QIG +Q +T  AV AI+++G  IGR++++ +SIAAAVEEQ AAT EI RNVQ+AA G
Sbjct: 561 IAEQIGGIQNSTQSAVNAIKTVGAAIGRVDEVVSSIAAAVEEQNAATQEIVRNVQEAANG 620

Query: 673 TAQASQNIGQVRTAAGQTGQSAQEVLSVAQEVSSQTGRLQQQIDRFLSQVRS 724
             + + NI +V +AA  TG+ A  +  VA+ +      L + ++ FL+ V++
Sbjct: 621 NHEVTSNISEVSSAAHMTGEMASNMFKVAEVLEESGTSLGKHVETFLASVQA 672