Pairwise Alignments

Query, 725 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 615 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

 Score =  298 bits (763), Expect = 5e-85
 Identities = 176/404 (43%), Positives = 254/404 (62%), Gaps = 5/404 (1%)

Query: 322 LAKGISALVDGQKSSIAEASAATTHMLDNSRMMQIAVAGISILVSILVVWLYIGRIVIRR 381
           +A+G+  L    + +++E   +   +      + +  A I  L     V L++ R ++R 
Sbjct: 213 MAEGVKLLATQDRQTLSETVESNDEITTGLAGVMMTAAAIGAL-GCAAVTLFVLRGILRP 271

Query: 382 MMDLKTGMGRIAAGDLDAEIALTGKDEIAEMGAALLVFRDTAREVETARTAAEAERQRAA 441
           +  L +    +A G LD  +      E+ E+ AAL +FRD    +ET R  AE E Q A 
Sbjct: 272 LATLTSTTAFLANGKLDTPVPEFRARELGEIAAALRIFRDNL--IETGRLKAEREEQEAY 329

Query: 442 G--ERRQTMLSLADQFENGVKTVVETVSAAATQMHQTAAGMVATADDTSRQAGNAAEAAE 499
              ER + M  LA  FE  V  VVE VS+A TQ+  TA      A+D ++QA + A+A++
Sbjct: 330 ADAERTRMMSDLALAFELSVAGVVENVSSAVTQLRSTAESFSQVAEDATQQATSVADASD 389

Query: 500 TASVNVDGAASAAHELSQSISEIARQVTESATIAAKAANEAERTDSTMRDLNEAASRIGA 559
            A+ NV   A+AA ELS SI  I  +V  +A IA +A  +AE+T+  +  L  AASRI A
Sbjct: 390 LAAGNVSAVAAAAEELSASIRVIGERVGHAARIADRAVIQAEQTNEIVASLGAAASRIDA 449

Query: 560 VLDLISDIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKQLASQTAKATEQIAGQIGA 619
           V+ +ISDIAGQTNLLALNATIEAARAGEAGKGFAVVA EVK LASQTA+AT  I  QI +
Sbjct: 450 VVKMISDIAGQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLASQTARATADIGEQIAS 509

Query: 620 MQQATGEAVGAIRSIGLTIGRLNDIAASIAAAVEEQGAATSEIARNVQQAAGGTAQASQN 679
           +Q+A+ EA+GAIR+IG TI  +++I++ +AAAVE+QG AT++I+RN+Q AA GT + + +
Sbjct: 510 VQKASQEAIGAIRAIGQTIAHISEISSDVAAAVEQQGGATADISRNIQHAATGTQKVTSH 569

Query: 680 IGQVRTAAGQTGQSAQEVLSVAQEVSSQTGRLQQQIDRFLSQVR 723
           IG V  A  + G  A  VL  A  +++Q+ RL+ ++D+F+++V+
Sbjct: 570 IGGVTVATREVGTHASNVLGAASGLTAQSDRLRTEVDQFIAKVK 613



 Score = 55.5 bits (132), Expect = 8e-12
 Identities = 67/303 (22%), Positives = 112/303 (36%), Gaps = 41/303 (13%)

Query: 462 VVETVSAAATQMHQTAAGMVATADDTSRQAGNAAEAAETASVNVDGAASAAHELSQSISE 521
           + E V   ATQ  QT +  V + D+ +   G A      A++   G A+    + + I  
Sbjct: 213 MAEGVKLLATQDRQTLSETVESNDEIT--TGLAGVMMTAAAIGALGCAAVTLFVLRGILR 270

Query: 522 IARQVTESATIAAKAANEAERTDSTMRDLNEAASRIGAVLD------------------- 562
               +T +    A    +    +   R+L E A+ +    D                   
Sbjct: 271 PLATLTSTTAFLANGKLDTPVPEFRARELGEIAAALRIFRDNLIETGRLKAEREEQEAYA 330

Query: 563 ------LISDIAGQTNL----LALNATIEAARAGEAGKGFAVVASEVKQLASQTAKATEQ 612
                 ++SD+A    L    +  N +    +     + F+ VA +  Q A+  A A++ 
Sbjct: 331 DAERTRMMSDLALAFELSVAGVVENVSSAVTQLRSTAESFSQVAEDATQQATSVADASDL 390

Query: 613 IAGQIGAMQQATGEAVGAIRSIGLTIGRLNDIAASIAAAVEEQ-------GAATSEI--- 662
            AG + A+  A  E   +IR IG  +G    IA       E+        GAA S I   
Sbjct: 391 AAGNVSAVAAAAEELSASIRVIGERVGHAARIADRAVIQAEQTNEIVASLGAAASRIDAV 450

Query: 663 ARNVQQAAGGTAQASQNIGQVRTAAGQTGQSAQEVLSVAQEVSSQTGRLQQQIDRFLSQV 722
            + +   AG T   + N       AG+ G+    V    + ++SQT R    I   ++ V
Sbjct: 451 VKMISDIAGQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLASQTARATADIGEQIASV 510

Query: 723 RSA 725
           + A
Sbjct: 511 QKA 513



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 22/84 (26%), Positives = 40/84 (47%)

Query: 92  DSAAAREAVSARIAAAKEEFNARLSRLRATGSAGSQLAAIEEASQGLLGNLAQLDQAAAE 151
           ++A A EA       A E  +      RAT   G Q+A++++ASQ  +G +  + Q  A 
Sbjct: 471 EAARAGEAGKGFAVVAGEVKSLASQTARATADIGEQIASVQKASQEAIGAIRAIGQTIAH 530

Query: 152 RVALGAERMAMMPKVMAAEAEIQK 175
              + ++  A + +   A A+I +
Sbjct: 531 ISEISSDVAAAVEQQGGATADISR 554