Pairwise Alignments

Query, 414 a.a., Tetracycline resistance protein, class C from Azospirillum sp. SherDot2

Subject, 396 a.a., tetracycline resistance protein from Caulobacter crescentus NA1000 Δfur

 Score =  187 bits (474), Expect = 6e-52
 Identities = 126/395 (31%), Positives = 200/395 (50%), Gaps = 21/395 (5%)

Query: 1   MSSVRPRKAAIAFILVTAALDIVAMGIVIPVLPALIEEFAGADAQAGTINGALVALWALM 60
           MS       A+A +L+   +++V  G++IP+LP        A  Q  T    + A ++L 
Sbjct: 1   MSEPAHSNRALAVLLLVVFINLVGFGVIIPLLPFYARSMDAAPRQVTT----MFAAYSLG 56

Query: 61  QFFSSPVIGSLSDRFGRRPVILLSALGLAADYVLMAVAPNLWWLVLGRAVAGITSSSFTT 120
           QFF  P  G LSDR GRRPV++++ +     Y+ +A APN+W  +L R   G  S + +T
Sbjct: 57  QFFGEPFWGRLSDRIGRRPVLIVTIIANTLAYLALAFAPNIWVAMLIRLFGGFGSGNIST 116

Query: 121 VFAYMADVTPPEQRARAYGLIGAAFSAGFIAGPLLGGVL----GEISPRAPFWGAGLLSG 176
           +  YMADVTPPE+RA   GL+GAAF AGF+ GP L  V+    G +  + P + A  ++G
Sbjct: 117 IQGYMADVTPPEKRAGRMGLLGAAFGAGFVIGPGLVMVMQPGAGALGYQLPLFLAAAMAG 176

Query: 177 LAFLYGLAVLPESLPQESRMAFSWRRANPFGAFQLLRSHPELSGLAMVNFMLHVSHQVFP 236
            A L  +  + ES    +  A    +A+   A     +HP LS + +V  +   +     
Sbjct: 177 TAALGVILFVKESRAPSAPGA---PQAHRLEALSQAAAHPVLSRVLLVTLISTAAFAGME 233

Query: 237 AVFVLYAAHRYGWSAWDVGLLLSMVGALDMLVQGLVVSRVVKWLGDRGTMIVGLFGGAVG 296
           AVF LYA  R+GW+A  V    +++G +  + QG++  R+ +  G+   +  GL   A  
Sbjct: 234 AVFGLYADTRFGWTASQVAACFALIGVIASIGQGVLTGRLARRFGEARVLTAGLSIIATS 293

Query: 297 LACMGLAPDGGWFAFAIVPNAL----WGLAMPTIQSLMTQRVGSSEQGQLQGANMSVASV 352
           L    + P     A A+V  A       L  P + +L+++      QGQ+ G NM+  S+
Sbjct: 294 LL---ITPFISKPALAVVAVAFTAFGQSLVFPCVGALISRATPPDRQGQMLGLNMAAGSL 350

Query: 353 AGILSPVFFGTVYSASVGIDPLFPHPGAAFLIAAL 387
           A I  P+  G ++  ++G    F   GAA ++ A+
Sbjct: 351 ARIGGPLLAGPLFGLAIGGPYWF---GAALMVPAI 382