Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 558 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  148 bits (373), Expect = 5e-40
 Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 21/313 (6%)

Query: 79  IAIELDGERVGALAIAAPADQARRFARLARHWVLATLRAETAETRRVALMRDLSERVERE 138
           +A  L+G R   +  AA A++ R               A T    R  ++   ++R ++ 
Sbjct: 246 LAQALNGWRSSIMEAAARAEEERL--------------ARTQREARQQVIEVATQRFDQS 291

Query: 139 VGGFATELADAGRRLESAVAAVRSAGTDGLRQAADAAGAARAVDGSVSAIAGMLDRLAST 198
           +    + +  A + L  +   + +      RQ++  + A      +V  +A     LAS+
Sbjct: 292 IETTLSRVKAAVQALHGSADTLSANAEQTQRQSSAVSTATDEATANVGTVASASTELASS 351

Query: 199 SDQISGDTSKAREISLAAASDSDRATTVMNSLRSAAEQIASVVKLINAIASQTNLLALNA 258
             +IS    ++ +I+ AA ++   AT  +  +  AA++I +VVKLI+ IASQTNLLALNA
Sbjct: 352 IHEISRQVRQSSDIAQAAETEVMEATRKVTGMAEAAQRIGNVVKLISDIASQTNLLALNA 411

Query: 259 TIEAARAGEAGRGFAVVANEVKALSRQTADATKQIADQVANLQKETAAVDEALGRIHSTI 318
           TIE+ARAG+AG+GFAVVA+EVK L+ QTA AT++I  Q++ +Q ET A  EA+  I  TI
Sbjct: 412 TIESARAGDAGKGFAVVAHEVKNLAGQTAKATEEITLQISAVQAETQAAVEAISGISHTI 471

Query: 319 GSIQAINGTVAAAIDEQATLTSDVARSLDRSRQDAMAAEQRIGDAEQTLGGVTRNLEELT 378
             I  +   +A A++EQ   T+++AR+++        A +   +  + + GV +   E  
Sbjct: 472 SRINELATAIAGAVEEQGAATAEIARNVE-------LANEGTSEVARNIAGVAQAASETG 524

Query: 379 ALSRSIAERAGSL 391
            +++++   A  L
Sbjct: 525 GMAQAVFTSANGL 537



 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 83/410 (20%), Positives = 165/410 (40%), Gaps = 58/410 (14%)

Query: 29  SGAVIASTARERIGTSHPVAGDIVARRLDERAVT------RDEAAKSGGAMREGYAIAIE 82
           +G + A+ A  R G+ + +A + + R + E           D+ ++    +++G ++  +
Sbjct: 33  AGDIAAAVAASRRGSDNALALESIERHIYEARFNIWVYFGTDDTSR----LQKGISLTND 88

Query: 83  L--DGERVGALAIAAPADQ--ARRFARL-----ARHWVLATLRAETA--ETRRVALMRDL 131
           L  + E + A  + AP  Q   R  A L      R   L+ LRA  A  +   +A  R  
Sbjct: 89  LIKEVEALHAATLFAPERQRQVREMAELIAAYKVRVEKLSELRARKAAFDDPELAASRSD 148

Query: 132 SERVEREVGGFATELADAGRRLESAVAAVRSAGTDGLRQAADAAGAARAVDGSVSAIA-- 189
           + ++   +      L++  R    A AA   +    + + +   G    V G V A+A  
Sbjct: 149 AGKISAAIDKIGASLSEGYRATSDAEAAQVESLIALVSRLSVIVGLLATVFGLVLALAIG 208

Query: 190 -----------GMLDRLAS--TSDQISGDTSKAREISLAAASDSDRATTVMNSLRSAAEQ 236
                      G + RLA   T   + G   +     LA A +  R++ +  + R+  E+
Sbjct: 209 RSITNPLGDLVGAVRRLAGGDTGLAVPGVERRDEFGPLAQALNGWRSSIMEAAARAEEER 268

Query: 237 IASVVKLINAIASQTNLLALNATIEAARAGEAGRGFAVVANEVKALSRQTADATKQIADQ 296
           +A           +T   A    IE A      +      + VKA  +    +   ++  
Sbjct: 269 LA-----------RTQREARQQVIEVATQ-RFDQSIETTLSRVKAAVQALHGSADTLSAN 316

Query: 297 VANLQKETAAVDEALGRIHSTIGSIQAINGTVAAAIDE---QATLTSDVARSLDRSRQDA 353
               Q++++AV  A     + +G++ + +  +A++I E   Q   +SD+A++ +    +A
Sbjct: 317 AEQTQRQSSAVSTATDEATANVGTVASASTELASSIHEISRQVRQSSDIAQAAETEVMEA 376

Query: 354 MAAEQRIGDAEQTLGGVTRNLEELTALSRSIA-------ERAGSLGSGLA 396
                 + +A Q +G V + + ++ + +  +A        RAG  G G A
Sbjct: 377 TRKVTGMAEAAQRIGNVVKLISDIASQTNLLALNATIESARAGDAGKGFA 426