Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 878 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  164 bits (414), Expect = 1e-44
 Identities = 97/278 (34%), Positives = 154/278 (55%), Gaps = 1/278 (0%)

Query: 116 RAETAETRRVALMRDLSERVEREVGGFATELADAGRRLESAVAAVRSAGTDGLRQAADAA 175
           R   A  RR A++ +++E  E  V G    +A A   ++     +         +AA AA
Sbjct: 590 RGRAAGERRRAMV-EMAENFESSVRGVLDRVARAAGEMQDMAQRMSRNAEATTGEAATAA 648

Query: 176 GAARAVDGSVSAIAGMLDRLASTSDQISGDTSKAREISLAAASDSDRATTVMNSLRSAAE 235
             ++  +GSV A+A   + L+++  +I      + +I+  AA++++R    +  L  +A 
Sbjct: 649 STSQQAEGSVKAVAAATEELSASIQEIGSQVHASSQIARKAATEAERTDRTVEGLSQSAN 708

Query: 236 QIASVVKLINAIASQTNLLALNATIEAARAGEAGRGFAVVANEVKALSRQTADATKQIAD 295
           +I  VV+LIN IASQTNLLALNATIEAARAGEAG+GFAVVA+EVK+L+ QT  AT++I+ 
Sbjct: 709 KIGEVVQLINDIASQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTGKATEEISS 768

Query: 296 QVANLQKETAAVDEALGRIHSTIGSIQAINGTVAAAIDEQATLTSDVARSLDRSRQDAMA 355
           Q+  +Q  T    +A+  I  TI  I  I  TVAAA+++Q+  T ++AR++  +      
Sbjct: 769 QIQAMQAVTQDAVDAIRSIAGTIREINEIAATVAAAVEQQSAATREIARNVGEAADGTQH 828

Query: 356 AEQRIGDAEQTLGGVTRNLEELTALSRSIAERAGSLGS 393
             + I    +       +   +   S ++A+   SLGS
Sbjct: 829 VRRNIDSVARAAAESGESATRVLTASSTVADEVRSLGS 866



 Score = 41.6 bits (96), Expect = 9e-08
 Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 34/279 (12%)

Query: 153 LESAVAAVRSAGTDGLRQAADAAGAARAVDGSVSAIAGMLDRLASTSDQISGDTSKAREI 212
           ++  +AA++         A DA  A+R +   +    G L   A+ +  + G    AR  
Sbjct: 479 VDGQIAAMKQEADTAAAGATDALSASRKM--LILFAVGSLIGAAALAWFVVGRNIVAR-- 534

Query: 213 SLAAASDSDRATTVMNSLR----SAAEQIASVVKLINAIASQTNLL-ALNATIEAAR--- 264
            L+  SD+ RA    N       + +++I  + + +       N   A NA  EA R   
Sbjct: 535 -LSQLSDAMRAIAAGNLNAPIPAAGSDEIGDMTRALMVFRDTANEANAANARAEAERGRA 593

Query: 265 AGEAGRGFAVVANEVKALSRQTADATKQIADQVANL-QKETAAVDEALGRIHSTIGSIQA 323
           AGE  R    +A   ++  R   D   + A ++ ++ Q+ +   +   G   +   + Q 
Sbjct: 594 AGERRRAMVEMAENFESSVRGVLDRVARAAGEMQDMAQRMSRNAEATTGEAATAASTSQQ 653

Query: 324 INGTV---AAAIDEQATLTSDVARSLDRSRQDAMAAEQRIGDAEQTLGGVTRNLEE---- 376
             G+V   AAA +E +    ++   +  S Q A  A       ++T+ G++++  +    
Sbjct: 654 AEGSVKAVAAATEELSASIQEIGSQVHASSQIARKAATEAERTDRTVEGLSQSANKIGEV 713

Query: 377 ------------LTALSRSI-AERAGSLGSGLAGRVTDV 402
                       L AL+ +I A RAG  G G A   ++V
Sbjct: 714 VQLINDIASQTNLLALNATIEAARAGEAGKGFAVVASEV 752



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 72/309 (23%), Positives = 116/309 (37%), Gaps = 54/309 (17%)

Query: 104 ARLARHWVLATLRAETAETRRVALMRDLSERVEREVGGFATELADAGRRLESAVAAVRSA 163
           AR   +  L+T  A T      A     ++R+        T    A + +E  + A+++A
Sbjct: 367 ARFRTYLELSTYAAATVGALNEATQAPSADRLAM----LETRFTTAAKAMEERLKALQAA 422

Query: 164 GTDGLRQAADAAGAARAVDGSVSAIAGMLDRLASTSDQISGDTS--KAREISLAAASDSD 221
           G DGL +   +A            +AG             GD S  K R   L AA++++
Sbjct: 423 GDDGLPKLVKSA----------ELLAGF----------GKGDNSLFKLRRSELDAAAENE 462

Query: 222 RATTVMNSLRSAAEQIASVVK-LINAIASQTNLLALNAT--IEAAR-----------AGE 267
           +   V+   R  A+Q A +V   I A+  + +  A  AT  + A+R            G 
Sbjct: 463 K---VLAENRQIAKQFAGMVDGQIAAMKQEADTAAAGATDALSASRKMLILFAVGSLIGA 519

Query: 268 AGRGFAVVANEVKALSRQTADATKQIADQVANLQKETAAVDE------ALGRIHSTIGSI 321
           A   + VV   + A   Q +DA + IA    N     A  DE      AL     T    
Sbjct: 520 AALAWFVVGRNIVARLSQLSDAMRAIAAGNLNAPIPAAGSDEIGDMTRALMVFRDTANEA 579

Query: 322 QAINGTVAA----AIDEQATLTSDVARSLDRSRQDAMAAEQR-IGDAEQTLGGVTRNLEE 376
            A N    A    A  E+     ++A + + S +  +    R  G+ +     ++RN E 
Sbjct: 580 NAANARAEAERGRAAGERRRAMVEMAENFESSVRGVLDRVARAAGEMQDMAQRMSRNAEA 639

Query: 377 LTALSRSIA 385
            T  + + A
Sbjct: 640 TTGEAATAA 648



 Score = 25.0 bits (53), Expect = 0.009
 Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 21/212 (9%)

Query: 2   DISATIAQDLCDSIGRELDSVVSIAGKSGAVIASTAR--ERIGTSHPVAGDIVARRLDER 59
           ++SA+I +     IG ++ +   IA K+      T R  E +  S    G++V    D  
Sbjct: 667 ELSASIQE-----IGSQVHASSQIARKAATEAERTDRTVEGLSQSANKIGEVVQLINDIA 721

Query: 60  AVTR-------DEAAKSGGAMREGYAIAIELD------GERVGALAIAAPADQA-RRFAR 105
           + T         EAA++G A +    +A E+       G+    ++    A QA  + A 
Sbjct: 722 SQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTGKATEEISSQIQAMQAVTQDAV 781

Query: 106 LARHWVLATLRAETAETRRVALMRDLSERVEREVGGFATELADAGRRLESAVAAVRSAGT 165
            A   +  T+R        VA   +      RE+     E AD  + +   + +V  A  
Sbjct: 782 DAIRSIAGTIREINEIAATVAAAVEQQSAATREIARNVGEAADGTQHVRRNIDSVARAAA 841

Query: 166 DGLRQAADAAGAARAVDGSVSAIAGMLDRLAS 197
           +    A     A+  V   V ++   +D L +
Sbjct: 842 ESGESATRVLTASSTVADEVRSLGSQVDSLVN 873