Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 562 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

 Score =  154 bits (389), Expect = 6e-42
 Identities = 106/302 (35%), Positives = 156/302 (51%), Gaps = 16/302 (5%)

Query: 115 LRAETAETRRVA------LMRDLSERVEREVGGFATELADAGRRLESAVAAVRSAGTDGL 168
           L AE AE  R A       M  L+ R E  VGG    ++     L   V A+  A     
Sbjct: 266 LEAEQAEANRQAEAEKRQSMDRLAARFEGTVGGMIRSVSTTTEALGQKVRAMSQAAEQTS 325

Query: 169 RQAADAAGAARAVDGSVSAIAGMLDRLASTSDQISGDTSKAREISLAAASDSDRATTVMN 228
           + A   A A+     +V  +A   + L  +  +I    S+A  ++  A   +  AT  ++
Sbjct: 326 QLAGIVASASDDTAANVQTVAAASEELTGSIVEIGRQVSEASRVAGEAVGMAQEATGRIS 385

Query: 229 SLRSAAEQIASVVKLINAIASQTNLLALNATIEAARAGEAGRGFAVVANEVKALSRQTAD 288
           SL  A E+I +VV LIN+IA QTNLLALNATIEAARAGEAG+GFAVVA+EVKAL+ QTA 
Sbjct: 386 SLAEAVERIGTVVGLINSIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKALANQTAK 445

Query: 289 ATKQIADQVANLQKETAAVDEALGRIHSTIGSIQAINGTVAAAIDEQATLTSDVARSLDR 348
           AT +I  Q++ +Q  T      + ++ + I  +  I   ++AA+++Q   T+++ RS+ +
Sbjct: 446 ATDEIGGQMSGIQTVTGQAVTEIQKVAAVIERLSGIATAISAAVEQQNAATAEITRSVQQ 505

Query: 349 SRQDAMAAEQRIGDAEQTLGGVTRNLEELTALSRSIAERAGSLGS---GLAGRVTDVLRQ 405
                  A    G+   ++ GVT   +E    +R + +  G L S   GL  +V D L  
Sbjct: 506 -------AAAGTGEVSSSISGVTAASDESGRTARELVDALGKLTSEAAGLNAQVGDFLAT 558

Query: 406 TR 407
            R
Sbjct: 559 VR 560