Pairwise Alignments

Query, 288 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 262 a.a., helix-turn-helix transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  145 bits (366), Expect = 9e-40
 Identities = 102/264 (38%), Positives = 139/264 (52%), Gaps = 13/264 (4%)

Query: 18  PPPVGALLRFWRQRRGLSQLDLACEADISTRHVSFLETGRSQPSRGMLIHLAERLDVPLR 77
           P   G  LR  R+R  LSQLDLA    +S RH+S +ETGR++PS G L +L   L+ PL 
Sbjct: 4   PSTAGEQLRQLRRRAKLSQLDLALITGVSQRHLSCIETGRAKPSPGTLHNLLTALETPLE 63

Query: 78  ERNALLVAAGYAPVYSEHRLDSPAMQAARKAVDLVLTGHEPFPALAVDRHWHLLAANRAV 137
           + N + +AAGYAP YS   L SPAM A R+AV+ VL  + P PA+ +D  W +L+AN + 
Sbjct: 64  QCNGVFLAAGYAPRYSATPLASPAMAAIREAVNHVLHANNPAPAILLDSQWQVLSANAST 123

Query: 138 APL--LEGVSAELLAGPVNVLRLSLHPDGLAGRIGNWSQWREHVLSRLTRQIEAGADPVL 195
             L  L G+  +   G +N+L   L   GL   + N  + R     R TR  EA  +P L
Sbjct: 124 GVLFGLLGIPPDAALG-LNLLTTLLQSGGLGDHLVNAEEIRTLAWQRATR--EALGNPEL 180

Query: 196 VALRSELQGYPAPASGSEGGSEAGHHPDVVVPLRLHTSFGPLNLFSTTTVFGTAVDVTLS 255
             L + L   P P       +E       +V  R+ ++ G L+  ST T FG   D+TL+
Sbjct: 181 ATLLTTL---PTPTH-----TELPAQMPPLVLTRVRSAQGELSFLSTFTTFGMPQDITLT 232

Query: 256 ELAIEAFFPADAETAERLRMQLAE 279
            L IE   PAD  T + +R   AE
Sbjct: 233 SLRIEHLIPADEATWQVMRRAYAE 256