Pairwise Alignments

Query, 341 a.a., Motility protein B from Azospirillum sp. SherDot2

Subject, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

 Score =  170 bits (430), Expect = 6e-47
 Identities = 109/334 (32%), Positives = 166/334 (49%), Gaps = 67/334 (20%)

Query: 9   PIIVKR--HLGSHHDEEEHNGTWKLAYADFVTAMMTFFLVMWLMNITTTEQRKGIADYF- 65
           PIIVKR    G  H    H G WK+A+ADF TAMM FFLV+WL++  T EQ+  IA YF 
Sbjct: 6   PIIVKRIKRFGDGH----HGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFK 61

Query: 66  NPVAVSQSNSGADGMLAGRSVDKSGSLTTPNAAGDQASPVASPPVVASVGDSDRQPAGRR 125
           +P+  S+S +                                 P +  +G S +      
Sbjct: 62  DPIGFSESGT---------------------------------PYIIDLGGSPQ------ 82

Query: 126 DPMPHPPGGTVPPVDLLRPATESAPAASATEAPAPTVQATRAELEALLDRQSSELTEKAA 185
                     + P   + P  +S P       P  ++Q  + ++E++     +E  E+  
Sbjct: 83  ----------LAPEKTINPEVKSEP------TPDTSLQLDQDKVESM-----AEQVERER 121

Query: 186 LESLERDLRQRIAASPDLSALQASLVIQQVPEGLRVQLTDQARFSMFKVGSAQMNDQGRR 245
           LE L ++L+ ++  +P L   +  ++ +   +GLR+Q+ D     MF +GSA++      
Sbjct: 122 LELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFED 181

Query: 246 LMRMVAAALASVPNPIGITGHTDALGYAPDAKYGNWELSSDRANAARRELLASGIPGGRI 305
           ++  +A  + +VPN I I+GHTDA  YA    +GNWELS++RANAARR L+A G P  ++
Sbjct: 182 ILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDTQV 241

Query: 306 VRVEGRADLDHFGASDPLDPSNRRISITLLRRPA 339
            RV G A    F   +PL+P NRRI I +L + A
Sbjct: 242 ARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKA 275