Pairwise Alignments

Query, 341 a.a., Motility protein B from Azospirillum sp. SherDot2

Subject, 346 a.a., Motility protein B from Pseudomonas sp. DMC3

 Score =  165 bits (418), Expect = 1e-45
 Identities = 108/334 (32%), Positives = 156/334 (46%), Gaps = 68/334 (20%)

Query: 9   PIIVKR--HLGSHHDEEEHNGTWKLAYADFVTAMMTFFLVMWLMNITTTEQRKGIADYF- 65
           PIIVKR   + + H    H G WK+A+ADF TAMM FFLV+WL++  T EQ+  IA YF 
Sbjct: 6   PIIVKRVKRIAAGH----HGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFK 61

Query: 66  NPVAVSQSNSGADGMLAGRSVDKSGSLTTPNAAGDQASPVASPPVVASVGDSDRQPAGRR 125
           +PV  S+S +                                 P +  +G +        
Sbjct: 62  DPVGFSESGT---------------------------------PYIIDLGGTP------- 81

Query: 126 DPMPHPPGGTVPPVDLLRPATESAPAASATEAPAPTVQATRAELEALLDRQSSELTEKAA 185
                    T+ P + L P  +S P           V+              +E  EK  
Sbjct: 82  ---------TLAPENTLNPEVKSQPQPDKVTVDTDQVEGM------------AEQVEKER 120

Query: 186 LESLERDLRQRIAASPDLSALQASLVIQQVPEGLRVQLTDQARFSMFKVGSAQMNDQGRR 245
           LE L ++L+ ++  +P L   +  ++ +  P GLR+Q+ D     MF  GSA++      
Sbjct: 121 LELLLQELQNKVDENPQLQKFKDQILFEITPNGLRIQIMDAENRPMFDSGSARLKPYFED 180

Query: 246 LMRMVAAALASVPNPIGITGHTDALGYAPDAKYGNWELSSDRANAARRELLASGIPGGRI 305
           ++  +A  + +VPN I I+GHTDA  Y     YGNWELS++RANAARR L+A   P  ++
Sbjct: 181 ILLAMADTIKAVPNKISISGHTDAKPYIGTGDYGNWELSANRANAARRALVAGSYPDAQV 240

Query: 306 VRVEGRADLDHFGASDPLDPSNRRISITLLRRPA 339
            RV G A    F   +P +P NRRI I +L + A
Sbjct: 241 ARVVGYASSALFDRENPFNPVNRRIDIVVLTKKA 274