Pairwise Alignments

Query, 930 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 521 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  191 bits (486), Expect = 8e-53
 Identities = 160/581 (27%), Positives = 252/581 (43%), Gaps = 86/581 (14%)

Query: 340 LNHARDMAESARQAAEAANRAKGEFLAGLSHELRTPLNAVIGFADLIAREAEGPVGTPSY 399
           L   ++ AES+   A  A++AK EFL+ +SHELRTP+N + G  +L        +  P  
Sbjct: 12  LTSLKEQAESSADEARRASKAKSEFLSSMSHELRTPMNGLFGMIEL-------AIDNPDK 64

Query: 400 RQ-YAANVRDSGQHVLELINEILDHARAEAGALTIEEGHCDLEAAADFAVRMLTPRAERA 458
           R  Y      +G+ +L LIN+ILD ++ EAG + IE+   DL    D  V +      R 
Sbjct: 65  RNIYLRKAETAGRQLLVLINDILDISKIEAGKIKIEQAPVDLLQVLDDVVSLQRVYCHRK 124

Query: 459 GVLLSAVVAPAV-GALRGDDRRIRQILLNLIANGVKYTPSGG---SVTLSALLEDGTPVI 514
           G+    +  P +   ++GD  RI QIL NL++N +K+T  G     VT +          
Sbjct: 125 GLEFHYLKDPDLPHVIKGDITRISQILHNLLSNAIKFTEQGSVTLKVTYTKRPNGNYLSF 184

Query: 515 RITDTGLGIPAEDLDRVLEPFARVESADHRGVEGAGLGLPLTKRLVELHGGTLALRSTLG 574
            + DTG+GI +  LD + + F + + +  R   G  LGL + K+L +L  G + + S +G
Sbjct: 185 DVIDTGIGIESSKLDNIFKKFEQADQSTTREYGGTELGLSIAKQLAKLMLGDINVTSFVG 244

Query: 575 VGTTVTVRLPANRLLPAEALGMPATPPARPAPATNSAASSAASPSIAPSLTVPAQPLAQP 634
            G+T +  +                               AA  S  P + V        
Sbjct: 245 QGSTFSFTM-------------------------------AAEESQLPDINV-------- 265

Query: 635 LAPALSPPPSGPLSILLVDDDPTVRDMVAGLLRGWGHRVIAATNANEALVVLDGPEKLDL 694
                   PS  L   +VDD  T R+    ++      ++  +  +    + D P   D+
Sbjct: 266 -------EPSANLRCAIVDDLQTSREYFEHVVTSMS--IVPQSYDSAKAYLSDSPLAFDV 316

Query: 695 LLSDVVMPPGMDGTELARHTARMRPG-LPVLLASGFAAHAVGTPAGFGPNV-AMIAKPFS 752
           ++ D+ MP  M G +L      M P   P ++        +         +    AKP +
Sbjct: 317 IILDLSMPE-MSGVDLLEQLKAMNPDKFPKIILISAELERLEDENDVSELIWRTHAKPIN 375

Query: 753 IEDLRRQLARIAGRRVGAAPQAQAMAAQAIAAPPPAQPPAPPTPRPAGPPRLLIAEDLSI 812
               RR+L    GR +   P +     +                      R+L+AED  I
Sbjct: 376 ----RRELEHDLGRLIETKPVSHNDVKEG-----------------NKKKRILLAEDNEI 414

Query: 813 NRELLAALFKDSGYRIDLVADGAAAVEAVKAGDYDLVLMDVQMPEMDGLEASRIIRAMPP 872
           N E++  + +  GY+   V +G  AV+  K   +DL+LMD  MP M G+EAS I+R    
Sbjct: 415 NAEIVKTILQSEGYKFLHVKNGKDAVDVGKRHQFDLILMDCNMPVMGGIEASTILR--KA 472

Query: 873 PRGDLPILALTAGSSDEERRDCRDAGMNGHIGKPYERDLLL 913
              D PI+ALTA +  E++ +C  AGM   + KP ++D LL
Sbjct: 473 LEVDTPIVALTANAFAEDKEECLAAGMTDFLAKPLDKDTLL 513



 Score = 37.0 bits (84), Expect = 3e-06
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 2/123 (1%)

Query: 798 PAGPPRLLIAEDLSINRELLAALFKDSGYRIDLVADGAAAVEAVKAGDYDLVLMDVQMPE 857
           P+   R  I +DL  +RE    +       +    D A A  +     +D++++D+ MPE
Sbjct: 267 PSANLRCAIVDDLQTSREYFEHVVTSMSI-VPQSYDSAKAYLSDSPLAFDVIILDLSMPE 325

Query: 858 MDGLEASRIIRAMPPPRGDLPILALTAGSSDEERRDCRDAGMNGHIGKPYERDLLLRQIA 917
           M G++    ++AM P +    IL        E+  D  +     H  KP  R  L   + 
Sbjct: 326 MSGVDLLEQLKAMNPDKFPKIILISAELERLEDENDVSELIWRTH-AKPINRRELEHDLG 384

Query: 918 RTL 920
           R +
Sbjct: 385 RLI 387