Pairwise Alignments

Query, 756 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 715 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score =  280 bits (716), Expect = 2e-79
 Identities = 175/410 (42%), Positives = 231/410 (56%), Gaps = 43/410 (10%)

Query: 349 AEHALRQSQKMEAIGQLTGGVAHDFNNLLQAIGINLHVIDSRTEDERIAGPARLALQAVE 408
           AEH   + +KME IGQLTGG+AHDFNNLL  I   L ++  R +D+R       ALQA +
Sbjct: 343 AEH--HEMRKMETIGQLTGGIAHDFNNLLTPIMGTLDLVRRRLDDQRSRELVDCALQASD 400

Query: 409 RGATLTQHLLAFSRRQQLRPVPVDVATLVERTSRLLGRTLGQSVRIETEVAPGLWPAMID 468
           R  TL   LL F+RRQ L+P  V +  LV     L+ R+LG  + +  ++   L   ++D
Sbjct: 401 RARTLVGRLLTFARRQTLKPRAVALDALVSDMRDLIVRSLGPMIEVAIDIPSQLPAVIVD 460

Query: 469 PTQLEMALLNLALNARDAMPGGGTLWILAGNRTVAGPAAGDPAIGSRLPGAGPLPVQVEG 528
           P QLE+A+LNLA+NARDAM  GG L I A    V   A                   V G
Sbjct: 461 PHQLELAILNLAVNARDAMDDGGRLEISATLDDVPSAA-------------------VRG 501

Query: 529 LAAGDYVVLRVRDTGTGMAAEVAARAFEPFFTTKEVGRGTGLGLSMVHGLATQSGGGVEL 588
           L+AG Y  L + D G+GM+AE   R  +PFF+TK +G+GTGLGLSMV GLA QSGGG+ +
Sbjct: 502 LSAGRYARLTISDNGSGMSAETLKRCVDPFFSTKGIGKGTGLGLSMVQGLAAQSGGGLGI 561

Query: 589 DSWPGLGTTVTLYLP-RAEQAA---EVAAAPPPPPPPARAKVAETVPVGAGCAILLVDDE 644
           +S  G+GT V+++LP  A QAA   + +A  P  P P R              +LLVDDE
Sbjct: 562 ESEVGVGTRVSMWLPITASQAASEGDESADAPQAPRPTR--------------VLLVDDE 607

Query: 645 ELVRSATAGYLAQAGFAVREAADAAAALSLLDHGFRPDVIVTDHMMPGMTGLEMARTLRA 704
           ++VR      L   G+ V  AA AA AL L+D G  PDV+VTDH+M   TG ++AR LR 
Sbjct: 608 DMVRQTVTMQLQDLGYQVTGAASAATALRLIDDGLAPDVLVTDHIMQDKTGAQLARELRQ 667

Query: 705 RQDETPILMVTGYAEDLTSTAAAREMSLTVLSKPIEPSRLVRSIRDMASV 754
           R    P+L+++GYA    +   A+     VL+KP   S L   +  M SV
Sbjct: 668 RIPSLPVLIISGYA----NLTPAQMRGFEVLAKPFRRSELAARLVQMLSV 713