Pairwise Alignments

Query, 756 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 991 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  275 bits (702), Expect = 1e-77
 Identities = 173/407 (42%), Positives = 224/407 (55%), Gaps = 31/407 (7%)

Query: 346 REQAEHALRQSQKMEAIGQLTGGVAHDFNNLLQAIGINLHVIDSRT-EDERIAGPARLAL 404
           R Q E AL+Q+QKME+IGQLTGGVAHDFNNLLQ I  NL ++      +ER       AL
Sbjct: 455 RRQTEKALQQAQKMESIGQLTGGVAHDFNNLLQVIAGNLQLLSKDVIGNERAERRLENAL 514

Query: 405 QAVERGATLTQHLLAFSRRQQLRPVPVDVATLVERTSRLLGRTLGQSVRIETEVAPGLWP 464
             V RGA L   LLAF RRQ L P  +++A  V     LL R+LG+ + +E   + GLW 
Sbjct: 515 AGVHRGAKLASQLLAFGRRQALEPRVINIARFVTGMDDLLRRSLGEGIEVEVITSGGLWN 574

Query: 465 AMIDPTQLEMALLNLALNARDAMPGGGTLWILAGNRTVAGPAAGDPAIGSRLPGAGPLPV 524
              DP Q+E ALLNLA+NARDAM G G L I  GN  +    A   +             
Sbjct: 575 TYADPNQVENALLNLAINARDAMEGHGKLTIEVGNAVLDRDYARKHS------------- 621

Query: 525 QVEGLAAGDYVVLRVRDTGTGMAAEVAARAFEPFFTTKEVGRGTGLGLSMVHGLATQSGG 584
               ++AG YV+L V DTG+GM+ E+  + FEPFF+TK  G+GTGLGLSMV+G A QS G
Sbjct: 622 ---EVSAGQYVMLAVTDTGSGMSPEILEKVFEPFFSTKPEGKGTGLGLSMVYGFAKQSSG 678

Query: 585 GVELDSWPGLGTTVTLYLPRAEQAAEVAAAPPPPPPPARAKVAETVPVGAGC-AILLVDD 643
            V + S  G GTTV +YLPR+    +            R  V  T PV  G   IL+V+D
Sbjct: 679 HVNIYSEVGQGTTVKMYLPRSAADED------------REVVMPTGPVEGGTETILVVED 726

Query: 644 EELVRSATAGYLAQAGFAVREAADAAAALSLLDHGFRPDVIVTDHMMPG-MTGLEMARTL 702
           +E VR+     L   G+ V  A DA A L++++ G   DVI TD +MPG +   EMAR  
Sbjct: 727 DEEVRNTVVETLGDLGYRVLTARDAQAGLTVVESGIPIDVIFTDVVMPGSLKSREMARRA 786

Query: 703 RARQDETPILMVTGYAEDLTSTAAAREMSLTVLSKPIEPSRLVRSIR 749
           + R     +L  +GY E+        +  + +LSKP     L R +R
Sbjct: 787 QERLPNLAVLFTSGYTENSIVHGGKLDAGVELLSKPYTREALARRLR 833



 Score = 57.4 bits (137), Expect = 4e-12
 Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 5/111 (4%)

Query: 638 ILLVDDEELVRSATAGYLAQAGFAVREAADAAAALSLLDHGFRPDVIVTDHMMPGMTGLE 697
           +LLV+D+EL+R  +   L+ +GFAV EA +AA AL +++     DV+VTD  +P M G E
Sbjct: 874 VLLVEDDELIRMNSTEMLSDSGFAVVEAGNAAQALEVIE-ADPIDVLVTDLGLPDMKGGE 932

Query: 698 MARTLRARQDETPILMVTGYAEDLTSTAAAREMSLTVLSKPIEPSRLVRSI 748
           +A     R+    I+  TG   D      A E S  +L+KP +  ++V ++
Sbjct: 933 LAAEALRRKPGLAIVFATG---DSHLPEGAPE-SAVLLTKPYDEQQIVAAV 979