Pairwise Alignments
Query, 1142 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Subject, 1120 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Score = 289 bits (740), Expect = 8e-82
Identities = 237/700 (33%), Positives = 330/700 (47%), Gaps = 74/700 (10%)
Query: 439 RELAANR-----LASSEARYRAMFEAVGQPIVTIDEHGTIDAFNRAAERLFGYRAADMVG 493
R LAA R L + AR A+ + + IVT G I+A N AA +F ++VG
Sbjct: 269 RSLAAQREQGKELEETNARLSAIVDTAAEGIVTARPDGVIEAANPAAHAIFRCAPGELVG 328
Query: 494 GPMTRLMPT-AMGAVHDGL--LATYRESDASAPRSEIRELTGRRKDGSE----FPLEVTL 546
P+ +PT + L +A R + A R EI L D + FPL ++
Sbjct: 329 RPVVDFLPTDRRSGISRALEEIARGRHAMDLATRGEIIALRVAADDAGDRTESFPLAYSM 388
Query: 547 AGWREGDRRYVTGALRDVTAQREIEASLRRAKEAADQANRAKGEFLATMSHEIRTPMNGV 606
A + LRD+T ++ +E +LR AKE A+ R K EFLATMSHEIRTPMNGV
Sbjct: 389 ALVKTAAGPLYAAILRDLTEEKRLEHTLRDAKERAEDGQRIKMEFLATMSHEIRTPMNGV 448
Query: 607 LGALALVEGPNLNEEQRQLLDVANRSGNALLQIIDDILDLSKLEAGKAEVEPVDFELRAV 666
+G L+ + EQR + S +LL II+DILD SK++AG+ ++E +FEL +
Sbjct: 449 IGMAGLLLDTPMEAEQRTYAETIRDSAESLLVIINDILDFSKIDAGRLDLEVGEFELVPM 508
Query: 667 LGDSIDLLEPTACGRGLILTREVASAVPDRVRADLRRIRQVLVNLVGNALKFTNRGGVSV 726
+ ++L P A +GL L V + + D R+RQ+L+NL GNA+KFT+ G V++
Sbjct: 509 VESVAEILAPRAAAKGLDLASFVPPGLRGPLLGDAGRLRQILLNLAGNAVKFTDSGSVTI 568
Query: 727 RVALE----GAGKGAAALAADGGFFLRFEVVDTGIGIPENVQQTLFRRFTQADSSTTRRF 782
++ E G A A+ G +RFEV DTGIGIPE + LF FTQ DSS RR
Sbjct: 569 LLSEEPDERQEADGPDAGKAEDGVRVRFEVRDTGIGIPEEERPRLFAMFTQVDSSPARRH 628
Query: 783 GGTGLGLAISRELVTLMGGRIGVVSTEGKGSTFWFTVRCEPAADPSAGVLTVPCAPEPVP 842
GGTGLGLAI + L LMGGRIGV S G GS FW +V + V A P P
Sbjct: 629 GGTGLGLAICKRLAELMGGRIGVDSELGTGSVFWVSVPLKRG---------VGSAHPPAP 679
Query: 843 AAGDGVAGGTAQPAGLHVLVAEDNEINRDIVVTMLRRAGHRVTAVEDGLQAV-RLVDEG- 900
AG +L+ +D +NRD++ + G V E G QA+ RLV
Sbjct: 680 ---------IGNWAGRRLLLVDDIAVNRDLLTRQIDGFGIVVETAESGEQALDRLVAAAR 730
Query: 901 ---GFDLVLMDVQMPVMDGVTATRHIRTMPGEAARLPIVALTGNVMPGHRAEYLAAGMTA 957
FD ++D +MP + G R IRT+P E A + + + + G A +
Sbjct: 731 LGTPFDAAILDHRMPGLTGPEVARRIRTIP-ELAGIRLALASSQRLEGQE----QAPVDT 785
Query: 958 YLTKPIVSADLFDVLA------SVAASRAAGGTWGDSGLPPRAPLASASPATP--SPAPS 1009
+L KPI + L LA +++ + A +W D+ P P A P SPA
Sbjct: 786 HLPKPIRFSTLCQCLARLLERPALSLAGAPAASWPDAA-PGSGPAAGNVIPRPIDSPAAV 844
Query: 1010 EAEAWRAVPLLDDGQASSLRAVIGEEAWAQ---TVVAFRR------TVSDSVAAIRAAAG 1060
A + P + +R ++ E+ T+ RR VS+ A+ A
Sbjct: 845 PPTAAKIDPAPNGQPTPRVRVLVAEDNPVNQQLTLALLRRAGVSAEAVSNGEEAVEAVTA 904
Query: 1061 REGRAV------------PPVRIAHTLKGTAANIGAVRLS 1088
R V R L GTAA I V L+
Sbjct: 905 RPYDLVLMDVQMPVMDGLAATRRIRKLSGTAARIPVVALT 944
Score = 155 bits (392), Expect = 2e-41
Identities = 115/314 (36%), Positives = 157/314 (50%), Gaps = 28/314 (8%)
Query: 823 PAADPSAG-----VLTVPCAPEPVPAAGDGVAGGTAQPAGLHVLVAEDNEINRDIVVTML 877
P + P+AG + P A P A D G P + VLVAEDN +N+ + + +L
Sbjct: 824 PGSGPAAGNVIPRPIDSPAAVPPTAAKIDPAPNGQPTPR-VRVLVAEDNPVNQQLTLALL 882
Query: 878 RRAGHRVTAVEDGLQAVRLVDEGGFDLVLMDVQMPVMDGVTATRHIRTMPGEAARLPIVA 937
RRAG AV +G +AV V +DLVLMDVQMPVMDG+ ATR IR + G AAR+P+VA
Sbjct: 883 RRAGVSAEAVSNGEEAVEAVTARPYDLVLMDVQMPVMDGLAATRRIRKLSGTAARIPVVA 942
Query: 938 LTGNVMPGHRAEYLAAGMTAYLTKPIVSADLFDVLASVAASRAAGGTWGDSGLPPRAPLA 997
LT N M G A L AGM YL+KPI + L D +A A G + G +G P A
Sbjct: 943 LTANAMQGDAAICLEAGMDDYLSKPINARKLLDTIARFIPPAADGKSDG-AGQAASPPKA 1001
Query: 998 SASPATPSPAPSEAEAWRAVPLLDDGQASSLRAVIGEEAWAQTVVAFRRTVSDSVAAIRA 1057
+ PAT ++ + LR +G++ +A + F + +RA
Sbjct: 1002 DSGPAT----------------VNTEKIEELRDALGKDGFALLLETFFGDSPQHLDLLRA 1045
Query: 1058 AAGREGRAVPPVRIAHTLKGTAANIGAVRLSRLASLLEQRA----LDHGGWTAGDPHCEA 1113
A R G R AH LKG+AAN+G R++ A L A LD TAG+ +
Sbjct: 1046 AIAR-GDRTGIEREAHILKGSAANVGFDRMAETAHHLVDAARRGDLDALTATAGERVADE 1104
Query: 1114 LEGVAEATLDALAS 1127
L +A + +A+
Sbjct: 1105 LSAARKAAVALVAT 1118
Score = 73.6 bits (179), Expect = 8e-17
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 29/281 (10%)
Query: 83 NWTH-------GITQMLRQAVERSSILVQLAVIDEHGDLIHTSVEDAPVRIHLADREHFR 135
NWT +T ML + RS L L ++D G ++ T+ P +L + + FR
Sbjct: 19 NWTGEDGAPGPDVTAMLTDRLRRSPHLRGLTLLDRTGRIVATTEGAYPAATYLTELDVFR 78
Query: 136 VHANNPAAGLFIGKPVFGRA----------SGKWSIQLTRRISNSDGSFAGVLVASMDPF 185
+ A GL IG P GR+ SG+W + ++R + +DG+ V+VA+++P
Sbjct: 79 LQAAAQGNGLVIGDPRPGRSLIDRAPAGERSGRWLLPMSRALREADGTLQAVVVATVNPD 138
Query: 186 YFSRSLEELDVGPNGA-----VAIVGTDG-ILRARSLMNDRIVGRDVGESPTLQ--MARL 237
YF + L G GA +A+ DG +L + + D I + +P + + +
Sbjct: 139 YF-QGLYRAVQGGTGAGMGDRIALYRYDGTLLTVQPQIGDEI-AKSFAATPLFRHYLPQA 196
Query: 238 RPSGFVRTASVIDGIP--RLQSFRTLASYPLIVTTAFDEGSFLADTRRRQRVYLLAAAAC 295
F + + + P R+ ++RT +PLI+T + + LA R R+ L +
Sbjct: 197 EYGVFRHSGTDVGAGPGTRIVAYRTTPVWPLILTVSVRTDTVLAPWRDNLRMASLLSGGM 256
Query: 296 SAGLIGLALLATRQTARLAALARQLAQSEERFRDQAETASD 336
L LL R A ++L ++ R +TA++
Sbjct: 257 ILLLSLFGLLLARSLAAQREQGKELEETNARLSAIVDTAAE 297