Pairwise Alignments

Query, 221 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 250 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 65.5 bits (158), Expect = 9e-16
 Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 36/217 (16%)

Query: 9   IALGQVVFIDLVLAGDNAIVVGMAAAGVAREKRARVIFWGIAAAVVLRIG------FALA 62
           +AL  ++ +++VL  DN I + +    +  + RA+    GI+ A+VLR+G      F + 
Sbjct: 15  VALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLGLLSTIAFIVQ 74

Query: 63  AT-KVMDIIG--------LTLAGGLLLLW-VCWKLFRELRSQREEAQAAALVADGDRDGD 112
            T  V ++ G        + +AGGL L+W    ++   +  + EE + +A        G+
Sbjct: 75  LTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSA--------GN 126

Query: 113 EAGDGGASVPAGGGKSVGTAIWEVIVADVSMSLDNVLAVAGAAREHLWVMAIGLLLSVAL 172
               G A+           AI ++++ D+  S+D+++   G   EHL +M I ++ SV +
Sbjct: 127 VVAIGFAA-----------AIGQILLLDLVFSIDSIITAVGMT-EHLPIMIIAVVTSVIV 174

Query: 173 MGAAASVIARLLNRFHWIAYLGLLVIVYVAVRMIWQG 209
           M  AA  +A+ +N    +  L L  ++ + + +I +G
Sbjct: 175 MLVAAEPLAKFINDNPTVVMLALGFLIMIGMTLIAEG 211