Pairwise Alignments

Query, 412 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

Subject, 415 a.a., multidrug efflux RND transporter subunit MdtA from Escherichia coli ECOR38

 Score =  147 bits (371), Expect = 6e-40
 Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 30/348 (8%)

Query: 79  PPTPVALAEATVQTIPKYLSAIGTLQAARQVTVAPEVAGRVDRIPFESGARVKAGDPLVQ 138
           P  PV  A A  Q +P+YL+ +GT+ AA  VTV   V G++  + F+ G +VKAGD L +
Sbjct: 58  PLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAE 117

Query: 139 LND-------ATEQADLLAQRAQARLAELNLERYRDLRRSQATPQSNVDQYQAQLDEINA 191
           ++        A  Q  L   +A    A  +L RY+ L ++    +  +D  QA + E   
Sbjct: 118 IDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLVKTNLVSRQELDAQQALVSETEG 177

Query: 192 NMKRTSALIGQ-------KLIKAPFDGELGIRQVNVGDYVNPGAT--IVTLTDLSQLYIN 242
            +K   A +           I AP DG +G++QV+VG+ ++ G T  IV +T    + + 
Sbjct: 178 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLL 237

Query: 243 FTLPEQSFTKL----SVGQSVLINV-DALPGRDF-EAKITTIEPQVSADTRAVKVQATMD 296
           FTLPE     +      G+ +++   D    +   E  + +++ Q+ A T  +KV+A  +
Sbjct: 238 FTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFN 297

Query: 297 NRERQLRPGMFANVRVVLPPQPNTLTVPETAVDYTVYGDSVFVATQQKTQDGKEQLVVER 356
           N++  L P  F N R+++  + N + +P  A+     G  V+V   +          V +
Sbjct: 298 NQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENK--------VSK 349

Query: 357 KPVKVGDRLANRVEIRSGVNAGDRVVVSGQLKLANGAAVVPAEKNPLT 404
             V  G + + +V IR+G++AGDRVV  G  +L  GA V   E    T
Sbjct: 350 HLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSAT 397