Pairwise Alignments

Query, 783 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1311 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  276 bits (705), Expect = 7e-78
 Identities = 213/614 (34%), Positives = 307/614 (50%), Gaps = 97/614 (15%)

Query: 157 FIIGKRSLKPLIIVASPIIEDGRIIRVMGVAVDLTWLTDLVKVLKQPDARVMVLDRHGVI 216
           F+    ++ P+ I A P+ EDGRI+  + V  D+T    ++  L++ + R+ V     + 
Sbjct: 359 FVRRDGTIFPIAITAVPLREDGRIVGSVTVFQDITERQRMLTALQESEERLTVALDASIT 418

Query: 217 VARQPDP--------EGWLNRNIGNMPHIRQMLREKDGTLDAESADGRGRLW-AFRHSDE 267
                +P        + WL            ML    G L      GRG  W A  H  +
Sbjct: 419 GLWDWNPVTDHAYFSDLWLG-----------MLGYAPGELP-----GRGATWLALLHEGD 462

Query: 268 TDTVFAVGMPTGPIMAEARRDLWQSLGLLAIAALVSVTALWVLLRASVLRWVWELGTAAT 327
            D V A                        +A    V  +   +R     WVW L     
Sbjct: 463 RDRVLATLEDH-------------------VAGRAPVYEVEFRMRHKSGAWVWILSA--- 500

Query: 328 RIGDGGGGTVIEADRAPHEFRVVSHAFNNMSRRLKQREQELRSAMEEARAGSRAKEEFLA 387
                G  T  +AD  P     ++    +++ R K+ E EL  A EEA   +R K +FLA
Sbjct: 501 -----GKVTDRDADGLPTR---ITGIHKDVTDR-KRTEDELARAKEEADRANRQKSDFLA 551

Query: 388 TMSHEIRTPMNGVIGFAEMLLETPLTAEQRRYASQVRDAGRSLLTVINDVLDLSKLEAGR 447
            MSHEIRTPMN VIG + ++++T LT  QR Y  ++  + RSLL +IND+LD SK+EAG+
Sbjct: 552 NMSHEIRTPMNAVIGLSHLMMKTELTPRQRDYLDKIHASSRSLLGIINDILDFSKVEAGK 611

Query: 448 LDLVSVPFRLDDLADRCVAIVRLAAEQKGLELQTSISATARGFVMGDPDRLRQLLLNLLS 507
           L + ++PF + D+      +V     +KGLEL   +     G ++GDP RL Q++LNL+S
Sbjct: 612 LTIETIPFHIGDVLQEVATVVLPKVREKGLELIVDLHGGVPGTLVGDPLRLGQVILNLVS 671

Query: 508 NAVKFTDRGSVRLTVKAIEDSGKSGGRICT-------FTVTDSGIGIAPERQRDLFQRFT 560
           NAVKFT+RG V +TV         GGRI T         V D+GIG++PE+   LF+ FT
Sbjct: 672 NAVKFTERGEVAVTV---------GGRIGTADDYRLEVEVCDTGIGMSPEQAAALFRPFT 722

Query: 561 QLE----RGRGGTGLGLAICRRLVELMGGEIGMESQLGTGSTFWFSLPLLPAGSAAIQPD 616
           Q +    R  GGTGLGLAICR+LVELMGG + +ES+ G GS F FS+    A  A    D
Sbjct: 723 QADSSTTRRFGGTGLGLAICRQLVELMGGTVSVESRPGEGSIFRFSIRCRVA--AGDTTD 780

Query: 617 NAILSPVESGGAGARILLAEDLAMNRDLAVTMLTRAGHRVDAVDDGAAAVAAVQE----- 671
           + + S +       R+L+ +D    R +   ML R G  V++V DG AA+  V+E     
Sbjct: 781 DRLPSDL----MDRRVLVVDDSDAVRSILTDMLERFGLTVESVGDGLAALRRVEEGQTGI 836

Query: 672 -QPYDLVLMDVQMPVMDGLEATRRIRALPGPVSRIPILALTA-------GVMQIEVERCL 723
             P +LV++D +MP +DG+E  RR+RALPG  ++ P++  TA       G +   +E   
Sbjct: 837 GPPVELVVLDWRMPELDGVETLRRLRALPG--AQPPVVMTTAYGADGVQGALDCALENNG 894

Query: 724 QAGMNAHLAKPLEK 737
            AG +  +   LEK
Sbjct: 895 AAGPDRPVTAVLEK 908



 Score = 99.0 bits (245), Expect = 1e-24
 Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 8/156 (5%)

Query: 601  FSLPLLPAGSAAIQPDNA---ILSPVESGG----AGARILLAEDLAMNRDLAVTMLTRAG 653
            F   ++  G AA +P  +   +  P +S       G  +LL ED  +N+ +A  +L   G
Sbjct: 916  FDSVMMALGGAAARPAESARRVHDPAQSTELSALVGRSVLLVEDNLVNQQVACGLLELVG 975

Query: 654  HRVDAVDDGAAAVAAVQEQPYDLVLMDVQMPVMDGLEATRRIRALPGPVSRIPILALTAG 713
                 V  G  A+  ++E  +DLVLMDVQMP +DG E TR IR     +S +PI+A+TA 
Sbjct: 976  IEATVVGSGEEALQCLREVKFDLVLMDVQMPGLDGYETTRLIRR-KLELSSLPIVAMTAH 1034

Query: 714  VMQIEVERCLQAGMNAHLAKPLEKSKLLAAIGRWAR 749
             M  + ERCL +GMN H++KP++   L AA+ RW +
Sbjct: 1035 AMAGDRERCLDSGMNDHVSKPIDPETLYAALARWLK 1070