Pairwise Alignments

Query, 304 a.a., RCS-specific HTH-type transcriptional activator RclR from Azospirillum sp. SherDot2

Subject, 312 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  249 bits (637), Expect = 4e-71
 Identities = 138/298 (46%), Positives = 183/298 (61%), Gaps = 6/298 (2%)

Query: 1   MRLYGVRYRRLQFAPPFGIRFGRDEGRAQFHFVACGTAILRGRTGMLHELHAGDAVLLPR 60
           +RL GV Y R + A P+   F   +  A+FHF+  G A L+  +G    L  GDAVLLPR
Sbjct: 12  LRLDGVEYGRCRLATPWATAFPEQDA-ARFHFIGVGQAKLQKPSGEWLTLTCGDAVLLPR 70

Query: 61  GGAHDLVSDADGQGLDLGGFDEAALCETVGSIKSCPADTCRSKDTVIFSGCMEFDLGAMH 120
           G AH L S           F +  +C+ V  ++   A      DTV F+  M F++  +H
Sbjct: 71  GHAHVLGSGESVTPSPFDHFGKKEVCQGVFDLQCASA----GGDTVAFTASMRFNMDNLH 126

Query: 121 PLIGLMPEVMLVGTLLDRYPEILPMLEAMEREARTERAGFAGILARLADVVSAFIVRGWV 180
           PL+ LMP+VML   L    P I  +LEAM RE    R G  GILARLADV++A ++R WV
Sbjct: 127 PLLQLMPDVMLTSDLAKSDPAIPHLLEAMTREVELNRVGAGGILARLADVLTATLIRTWV 186

Query: 181 ECGCGDARGWVEALRDPRLGRVIAALHRDPGRDWTVAQLAAEMGSSRSVFAERFLAVTGM 240
           E GCGD+ GW+ A+R+P LGRV+AA+H +P +DW+V +LA+ MG+SRS FAERF  V G 
Sbjct: 187 EHGCGDSSGWLAAVRNPELGRVLAAIHLNPEKDWSVEELASLMGASRSSFAERFTRVVGE 246

Query: 241 TPLQYVTELRMRLAAQWIGRENMPIETAAYRLGYGSQAAFSRAFKRVTGQPPGAARNR 298
           +P +YV  +RM  A  W+ RE M +  AA +LGY S+A+FSRAFKRV G PP   R +
Sbjct: 247 SPARYVVRVRMHQARLWL-REGMRVTVAAEKLGYDSEASFSRAFKRVLGAPPSQFRRK 303